VIOLIN: Vaccine Investigation and Online Information Network

yscF
Gene Name	yscF
Sequence Strain (Species/Organism)	Yersinia pestis CO92
VO ID	VO_0010914
NCBI Protein GI	16082743
Locus Tag	YPCD1.55
Genbank Accession	AL117189
Protein Accession	NP_395189
3D structure: PDB ID	3ET4
Other Database IDs	CDD:131160
Taxonomy ID	214092
Gene Starting Position	41025
Gene Ending Position	41288
Gene Strand (Orientation)	+
Protein Name	needle complex major subunit
Protein pI	7.35
Protein Weight	9570.09
Protein Length	165
Protein Note	type III secretion apparatus needle protein; TIGR02105
DNA Sequence	>NC_003131.1:41025-41288 Yersinia pestis CO92 plasmid pCD1, complete sequence AATGAGTAACTTCTCTGGATTTACGAAAGGAACCGATATCGCAGACTTAGATGCGGTGGCTCAAACGCTC AAGAAGCCAGCAGACGATGCAAACAAAGCGGTTAATGACTCGATAGCAGCATTGAAAGATAAGCCTGACA ACCCGGCGCTACTTGCTGACTTACAACATTCAATTAATAAATGGTCGGTAATTTACAATATAAACTCAAC CATAGTTCGTAGCATGAAAGACTTAATGCAAGGCATCCTACAGAAGTTCCCATA
Protein Sequence	>NP_395189.1 needle complex major subunit (plasmid) [Yersinia pestis CO92] MSNFSGFTKGTDIADLDAVAQTLKKPADDANKAVNDSIAALKDKPDNPALLADLQHSINKWSVIYNINST IVRSMKDLMQGILQKFP
Molecule Role	Protective antigen
Molecule Role Annotation	The P4 protein is an integral outer membrane protein that has a role in acquiring hemin and nucleosides (Green et al., 1991).
Related Vaccines(s)	Non-typeable H. influenzae rLP4/rLP6 and Moraxella catarrhalis UspA2 protein vaccine
References