VIOLIN: Vaccine Investigation and Online Information Network

H5R
Gene Name	H5R
Sequence Strain (Species/Organism)	Vaccinia virus
NCBI Gene ID	3707559
NCBI Protein GI	66275900
Locus Tag	VACWR103
Genbank Accession	AY603355
Protein Accession	YP_232985
Taxonomy ID	10245
Gene Starting Position	91870
Gene Ending Position	92481
Gene Strand (Orientation)	+
Protein Name	late transcription factor VLTF-4
Protein pI	7.61
Protein Weight	20316.25
Protein Length	203
Protein Note	late transcription factor VLTF-4; initiates transcription from late gene promoters; inhibition of DNA replication causes VLTF-4 to be diffusely distributed in the cytoplasm but is discretely localized during a productive infection; The poxviridae are enveloped unsegmented dsDNA viruses; unlike many dsDNA viruses that replicate in the host nucleus poxviruses encode their own replication machinery and therefore replicate in the cytoplasm; viral genes are expressed in a bi-phasic manner with early genes encoding non-structural proteins involved in genome replication and late genes encoding the viral structural proteins
DNA Sequence	>NC_006998.1:91870-92481 Vaccinia virus, complete genome AATGGCGTGGTCAATTACAAATAAAGCGGATACTAGTAGCTTCACAAAGATGGCTGAAATCAGAGCTCAT CTAAAAAATAGCGCTGAAAATAAAGATAAAAACGAGGATATTTTCCCGGAAGATGTAATAATTCCATCTA CTAAGCCCAAAACCAAACGAGCCACTACTCCTCGTAAACCAGCGGCTACTAAAAGATCAACCAAAAAGGA GGAAGTGGAAGAAGAAGTAGTTATAGAGGAATATCATCAAACAACTGAAAAAAATTCTCCATCTCCTGGA GTCAGCGACATTGTAGAAAGCGTGGCCGCTGTAGAGCTCGATGATAGCGACGGGGATGATGAACCTATGG TACAAGTTGAAGCTGGTAAAGTAAATCATAGTGCTAGAAGCGATCTCTCTGACCTAAAGGTGGCTACCGA CAATATCGTTAAAGATCTTAAGAAAATTATTACTAGAATCTCTGCAGTATCGACGGTTCTAGAGGATGTT CAAGCAGCTGGTATCTCTAGACAATTTACTTCTATGACTAAAGCTATTACAACACTATCTGATCTAGTCA CCGAGGGAAAATCTAAAGTTGTTCGTAAAAAAGTTAAAACTTGTAAGAAGTA
Protein Sequence	>YP_232985.1 morphogenesis-related, substrate of B1R kinase [Vaccinia virus] MAWSITNKADTSSFTKMAEIRAHLKNSAENKDKNEDIFPEDVIIPSTKPKTKRATTPRKPAATKRSTKKE EVEEEVVIEEYHQTTEKNSPSPGVSDIVESVAAVELDDSDGDDEPMVQVEAGKVNHSARSDLSDLKVATD NIVKDLKKIITRISAVSTVLEDVQAAGISRQFTSMTKAITTLSDLVTEGKSKVVRKKVKTCKK
Molecule Role	Protective antigen
References

H5R