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Vaxign: Vaccine Target Prediction and Design

Query ID	Submitted at	Status
DNF2NZR6QD	2009-11-12 10:48:20	All steps finished at: 2009-11-15 00:33:51

Found 3208 protein(s).

Record: 1 to 50 of 3208 Records.

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#	Sequence ID	Gene Symbol	Protein Note	Localization (Probability)	Adhesin Probability	Trans-membrane helices	MHC I Binding	MHC II Binding	Similar Human Protein	Similar Mouse Protein
1	BAPG_00001T0		| BAPG_00001 | Brucella ceti M490/95/1 peptidase M23B (translation) (652 aa)	Unknown (Prob.=0.2)	0.000	1	WLAGTFLTGV binds to HLA-A2 More...	VVEKAGWSN binds to H-2-IEk More...
2	BAPG_00002T0		| BAPG_00002 | Brucella ceti M490/95/1 ErfK/YbiS/YcfS/YnhG family protein (translation) (478 aa)	Unknown (Prob.=0.25)	0.000	0	REMTGKII binds to H-2-Kk More...	GGAPYDGFG binds to HLA-DRB1*1301 More...
3	BAPG_00003T0		| BAPG_00003 | Brucella ceti M490/95/1 chaperone protein clpB (translation) (875 aa)	Cytoplasmic (Prob.=0.926)	0.000	0	YLSQPLAKV binds to HLA-A2 More...	KEKYEQHHK binds to HLA-DPB1*0901 More...	YES	YES
4	BAPG_00004T0		| BAPG_00004 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (262 aa)	Unknown (Prob.=0.2)	0.000	0	NNNNNNNRK binds to HLA-A*1101 More...	DKQEEKAEQ binds to HLA-DPB1*0901 More...
5	BAPG_00005T0		| BAPG_00005 | Brucella ceti M490/95/1 predicted protein (translation) (91 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	STLFGMSCIM binds to Mamu-A*02 More...	ASTAEQAHA binds to H-2-IAd More...
6	BAPG_00006T0		| BAPG_00006 | Brucella ceti M490/95/1 modification methylase (translation) (296 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	YIPHAEIA binds to H-2-Kd More...	LHRFEHMHG binds to HLA-DQA1*0301/DQB1*0 More...	YES	YES
7	BAPG_00007T0		| BAPG_00007 | Brucella ceti M490/95/1 peptide chain release factor 1 (translation) (373 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	SEYSELQDV binds to Patr-B*2401 More...	YVKLASEYS binds to HLA-DRB1*1302 More...	YES	YES
8	BAPG_00008T0		| BAPG_00008 | Brucella ceti M490/95/1 phosphoenolpyruvate-protein phosphotransferase PtsP (translation) (757 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	RPQADVESAY binds to HLA-B*3508 More...	NPQAVHLAQ binds to H-2-IAd More...
9	BAPG_00009T0		| BAPG_00009 | Brucella ceti M490/95/1 aspartate kinase (translation) (424 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	YDAREYDTI binds to Mamu-B*01 More...	AVAVAAAVK binds to H-2-IAg7 More...
10	BAPG_00010T0		| BAPG_00010 | Brucella ceti M490/95/1 3-demethylubiquinone-9 3-methyltransferase (translation) (249 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	YIKEKVCAK binds to HLA-B8 More...	NIEVAKIHA binds to H-2-IAd More...	YES	YES
11	BAPG_00011T0		| BAPG_00011 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (298 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	10	ISYALPNFL binds to H-2-Kb More...	LGAGFTGIM binds to HLA-DRB1*1301 More...
12	BAPG_00012T0		| BAPG_00012 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (142 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	CDHGHEFEGW binds to Mamu-B*17 More...	EKFAEEARK binds to HLA-DPB1*0901 More...
13	BAPG_00013T0		| BAPG_00013 | Brucella ceti M490/95/1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (translation) (285 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RAIENGAFLI binds to H-2-Db More...	HWHVLQRAR binds to HLA-DR1 More...	YES	YES
14	BAPG_00014T0		| BAPG_00014 | Brucella ceti M490/95/1 glutaredoxin protein (translation) (89 aa)	Unknown (Prob.=0.2)	0.000	0	CPYCARAKAL binds to HLA-B7 More...	CPYCARAKA binds to H-2-IAd More...
15	BAPG_00015T0		| BAPG_00015 | Brucella ceti M490/95/1 phosphoribosyltransferase (translation) (263 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	LAPWMARWM binds to Mamu-A*01 More...	RWRFWRRRF binds to HLA-DRB1*1101 More...
16	BAPG_00016T0		| BAPG_00016 | Brucella ceti M490/95/1 methyltransferase (translation) (298 aa)	Unknown (Prob.=0.2)	0.000	0	RYDSLFNLM binds to Patr-A*0701 More...	AAEIYAERF binds to H-2-IEk More...	YES	YES
17	BAPG_00017T0		| BAPG_00017 | Brucella ceti M490/95/1 major facilitator transporter (translation) (413 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	10	IPKPRQHTL binds to HLA-B*0702 More...	IGAVPAVVI binds to H-2-IAg7 More...
18	BAPG_00018T0		| BAPG_00018 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (160 aa)	Unknown (Prob.=0.2)	0.000	0	HEKEREKL binds to HLA-B8 More...	KQLIKAAEA binds to HLA-DPB1*0901 More...
19	BAPG_00019T0		| BAPG_00019 | Brucella ceti M490/95/1 HemY domain-containing protein (translation) (526 aa)	Unknown (Prob.=0.2)	0.000	3	RRHLRTRKR binds to HLA-B*2705 More...	HHAHAKAIA binds to H-2-IAd More...
20	BAPG_00020T0		| BAPG_00020 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (459 aa)	Periplasmic (Prob.=0.983)	0.000	0	SFKAELDTY binds to Patr-B*2401 More...	GGMFALQWG binds to HLA-DPB1*0401 More...
21	BAPG_00021T0		| BAPG_00021 | Brucella ceti M490/95/1 uroporphyrinogen-III synthase (translation) (236 aa)	Unknown (Prob.=0.2)	0.000	0	APERLLPY binds to HLA-B*3501 More...	ALSRILGHA binds to HLA-DQA1*0301/DQB1*0 More...
22	BAPG_00022T0		| BAPG_00022 | Brucella ceti M490/95/1 porphobilinogen deaminase (translation) (315 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RRQALIRRL binds to HLA-B*2705 More...	VMYRGNVDT binds to HLA-DRB1*0701 More...	YES	YES
23	BAPG_00023T0		| BAPG_00023 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (360 aa)	Extracellular (Prob.=0.945)	0.000	0	LTDGLPFPY binds to HLA-A*0101 More...	MIAWAGAER binds to H-2-IEg7 More...	YES	YES
24	BAPG_00024T0		| BAPG_00024 | Brucella ceti M490/95/1 glycerol-3-phosphate dehydrogenase (translation) (327 aa)	Unknown (Prob.=0.25)	0.000	0	IPQASPIVL binds to HLA-B*0702 More...	GGGAWGTAL binds to HLA-DRB1*1301 More...	YES	YES
25	BAPG_00025T0		| BAPG_00025 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (97 aa)	Unknown (Prob.=0.2)	0.000	0	DYLKSLGDAL binds to H-2-Kd More...	ADKAAAEKI binds to H-2-IAg7 More...
26	BAPG_00026T0		| BAPG_00026 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (143 aa)	Unknown (Prob.=0.2)	0.000	0	NPRLQDMSL binds to HLA-B7 More...	WSWEMQKAR binds to HLA-DRB1*1101 More...	YES	YES
27	BAPG_00027T0		| BAPG_00027 | Brucella ceti M490/95/1 conserved hypothetical protein (translation) (219 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RLIPWFTKL binds to Patr-A*0701 More...	PPFWAFAWA binds to HLA-DPB1*0401 More...	YES	YES
28	BAPG_00028T0		| BAPG_00028 | Brucella ceti M490/95/1 ydeK (translation) (286 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	10	RPRPLFWLF binds to Patr-B*1301 More...	MVATAAVVV binds to H-2-IAg7 More...
29	BAPG_00029T0		| BAPG_00029 | Brucella ceti M490/95/1 GntR family transcriptional regulator (translation) (494 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	LSPQIVHALL binds to Patr-B*0101 More...	DGWLPQEAL binds to HLA-DR7 More...	YES	YES
30	BAPG_00030T0		| BAPG_00030 | Brucella ceti M490/95/1 DNA translocase ftsK (translation) (835 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	5	MTPQECRLI binds to Mamu-A*01 More...	AIAARVAVI binds to H-2-IAg7 More...
31	BAPG_00031T0		| BAPG_00031 | Brucella ceti M490/95/1 ammonium transporter (translation) (434 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	12	TLWLFIVYV binds to HLA-A2.1 More...	AGLVAALVI binds to H-2-IAg7 More...
32	BAPG_00032T0		| BAPG_00032 | Brucella ceti M490/95/1 predicted protein (translation) (61 aa)	Unknown (Prob.=0.2)	0.000	0	VSSFPRISF binds to Mamu-A*02 More...	APIAAPSRN binds to HLA-DRB1*0301 More...
33	BAPG_00033T0		| BAPG_00033 | Brucella ceti M490/95/1 acyl-CoA thioesterase II (translation) (301 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RELLSILDL binds to HLA-B*4001 More...	MWFHRPCRL binds to HLA-DR1 More...	YES	YES
34	BAPG_00034T0		| BAPG_00034 | Brucella ceti M490/95/1 ubiquinone biosynthesis hydroxylase (translation) (430 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	REFVKPRFAL binds to HLA-B*4001 More...	VGDAAHRIH binds to H-2-IAd More...	YES	YES
35	BAPG_00035T0		| BAPG_00035 | Brucella ceti M490/95/1 glyoxalase/bleomycin resistance protein/dioxygenase (translation) (124 aa)	Unknown (Prob.=0.2)	0.000	0	KPGLRPHY binds to HLA-B*3501 More...	HPDYYAAFV binds to H-2-IAg7 More...
36	BAPG_00036T0		| BAPG_00036 | Brucella ceti M490/95/1 succinate dehydrogenase iron-sulfur subunit (translation) (260 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	CGPMVLDGL binds to H-2-Dd More...	QAYRWLIDS binds to HLA-DRB1*0701 More...	YES	YES
37	BAPG_00037T0		| BAPG_00037 | Brucella ceti M490/95/1 succinate dehydrogenase flavoprotein subunit (translation) (614 aa)	Unknown (This protein may have multiple localization sites.) (Prob.=0.541)	0.000	0	APAAASKYTY binds to HLA-B*3508 More...	GGAGLRATL binds to HLA-DRB1*1301 More...	YES	YES
38	BAPG_00038T0		| BAPG_00038 | Brucella ceti M490/95/1 succinate dehydrogenase hydrophobic membrane anchor (translation) (132 aa)	Cytoplasmic Membrane (Prob.=0.946)	0.000	3	PLVLFFIGLV binds to HLA-A2.1 More...	FWYQRLSAV binds to HLA-DR1 More...
39	BAPG_00039T0		| BAPG_00039 | Brucella ceti M490/95/1 succinate dehydrogenase cytochrome b556 subunit (translation) (143 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	3	ILFGYTWAL binds to HLA-A2.1 More...	ITMTMSIVH binds to H-2-IAd More...	YES	YES
40	BAPG_00040T0		| BAPG_00040 | Brucella ceti M490/95/1 acetyltransferase (translation) (153 aa)	Unknown (Prob.=0.2)	0.000	0	AEERSWSKLV binds to H-2-Kk More...	HIYVHHDHR binds to HLA-DQA1*0301/DQB1*0 More...
41	BAPG_00041T0		| BAPG_00041 | Brucella ceti M490/95/1 3-isopropylmalate dehydratase large subunit (translation) (470 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	TLEQAINYWK binds to HLA-A*1101 More...	SPAMAAAAA binds to H-2-IAg7 More...	YES	YES
42	BAPG_00042T0		| BAPG_00042 | Brucella ceti M490/95/1 LSU ribosomal protein L19P (translation) (146 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	GVERVFPVY binds to HLA-A3 More...	ADKLAAAKA binds to H-2-IAg7 More...
43	BAPG_00043T0		| BAPG_00043 | Brucella ceti M490/95/1 permease (translation) (301 aa)	Cytoplasmic Membrane (Prob.=0.946)	0.000	7	LYLNFCDF binds to HLA-A*2402 More...	TYGWFFGVA binds to HLA-DPB1*0401 More...
44	BAPG_00044T0		| BAPG_00044 | Brucella ceti M490/95/1 predicted protein (translation) (84 aa)	Unknown (Prob.=0.25)	0.000	2	IVLSFATNL binds to H-2-Kb More...	LWQLWRGRH binds to HLA-DRB1*1101 More...
45	BAPG_00045T0		| BAPG_00045 | Brucella ceti M490/95/1 YbeA (translation) (159 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	GEAAARAAA binds to HLA-B44 More...	AAARAAAEA binds to H-2-IAg7 More...
46	BAPG_00046T0		| BAPG_00046 | Brucella ceti M490/95/1 antibiotic biosynthesis monooxygenase (translation) (121 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	LLADLDGFI binds to Patr-B*0101 More...	MIAVIFEAW binds to H-2-IEg7 More...
47	BAPG_00047T0		| BAPG_00047 | Brucella ceti M490/95/1 nipsnap family protein (translation) (108 aa)	Unknown (Prob.=0.2)	0.000	0	LPSLADYEAY binds to HLA-B*3508 More...	EAYRSRLAA binds to H-2-IAd More...
48	BAPG_00048T0		| BAPG_00048 | Brucella ceti M490/95/1 transcriptional regulator (translation) (113 aa)	Unknown (Prob.=0.2)	0.387	1	AGPHVAALL binds to H-2-Dd More...	EWFDYGRTM binds to HLA-DR1 More...
49	BAPG_00049T0		| BAPG_00049 | Brucella ceti M490/95/1 ArsR family transcriptional regulator (translation) (134 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	LFERMQEDQW binds to Mamu-B*17 More...	WSQRHQHLA binds to H-2-IAd More...
50	BAPG_00050T0		| BAPG_00050 | Brucella ceti M490/95/1 tRNA (guanine-N(1)-)-methyltransferase (translation) (245 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	AYCKNRRKI binds to H-2-Kd More...	GGAGMVMKA binds to HLA-DRB1*1301 More...	YES

Filter Analysis Results
Select Subcellular Localization	Any Localization Cellwall Cytoplasmic Cytoplasmic Membrane Extracellular Outer Membrane Periplasmic Unknown
Maximum Number of Transmembrane Helices
Minimum Adhesin Probability (0-1.0)
P Value Cutoff
No Similarity to Human Protein
No Similarity to Mouse Protein
MHC Class I & II Epitope Prediction by Vaxitope:
MHC Host Species	any species chimpanzee human macaque mouse
MHC Allele
Epitope Length
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