Vaxign: Vaccine Design

Vaxign: Vaccine Target Prediction and Design

Query ID	Submitted at	Status
ENJWSSYTNF	2010-05-17 16:20:06	All steps finished at: 2010-05-18 00:36:54

Found 3241 protein(s).

Record: 1 to 50 of 3241 Records.

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#	Sequence ID	Gene Symbol	Protein Note	Localization (Probability)	Adhesin Probability	Trans-membrane helices	MHC I Binding	MHC II Binding	Similar Human Protein	Similar Mouse Protein
1	gi\|163844200\|ref\|YP_001621855.1\|	BSUIS_B0003	replication initiation protein RepC	Unknown (Prob.=0.2)	0.245	0	IAFGFSLAPL binds to Patr-B0101 More...*	TIAYILQRY binds to H-2-IEg7 More...
2	gi\|163844201\|ref\|YP_001621856.1\|	BSUIS_B0004	hypothetical protein BSUIS_B0004	Unknown (Prob.=0.2)	0.000	0	FPAIYYGFHF binds to HLA-B3501 More...*	WNFHAGARH binds to H-2-IAd More...
3	gi\|163844202\|ref\|YP_001621857.1\|	BSUIS_B0005	hypothetical protein BSUIS_B0005	Unknown (Prob.=0.2)	0.234	0	ARLWNVAGL binds to HLA-B27 More...	GRGEQAQEK binds to HLA-DPB10901 More...*
4	gi\|163844203\|ref\|YP_001621858.1\|	BSUIS_B0006	hypothetical protein BSUIS_B0006	Unknown (Prob.=0.2)	0.000	0	FPFAAMVRQY binds to HLA-B3501 More...*	SGFSWVVYE binds to HLA-DPB10401 More...*
5	gi\|163844204\|ref\|YP_001621859.1\|	rbsK	ribokinase	Cytoplasmic (Prob.=0.997)	0.283	0	EVKHFTPFK binds to HLA-A11 More...	GANQAVAVA binds to H-2-IAg7 More...	YES	YES
6	gi\|163844205\|ref\|YP_001621860.1\|	BSUIS_B0008	hypothetical protein BSUIS_B0008	Cytoplasmic (Prob.=0.896)	0.153	0	APLHDPNVI binds to HLA-B0702 More...*	GETVVDWWG binds to H-2-IAk More...
7	gi\|163844206\|ref\|YP_001621861.1\|	BSUIS_B0009	hypothetical protein BSUIS_B0009	Cytoplasmic Membrane (Prob.=1)	0.236	7	MEGMMLVAAL binds to Mamu-A11 More...*	ALNIAAAAA binds to H-2-IAg7 More...
8	gi\|163844207\|ref\|YP_001621862.1\|	BSUIS_B0010	hypothetical protein BSUIS_B0010	Cytoplasmic Membrane (Prob.=1)	0.228	8	LLPSLGWFSL binds to HLA-A2.1 More...	GGIWLYWTR binds to H-2-IAk More...
9	gi\|163844208\|ref\|YP_001621863.1\|	BSUIS_B0011	hypothetical protein BSUIS_B0011	Cytoplasmic Membrane (Prob.=0.982)	0.137	0	TPAVLGPYML binds to HLA-B07 More...*	TAAPDPADR binds to H-2-IEg7 More...	YES	YES
10	gi\|163844209\|ref\|YP_001621864.1\|	BSUIS_B0012	hypothetical protein BSUIS_B0012	Unknown (Prob.=0.25)	0.258	1	EAKDKIMLI binds to HLA-B8 More...	GYDNVYSIQ binds to H-2-IAk More...
11	gi\|163844210\|ref\|YP_001621865.1\|	BSUIS_B0013	hypothetical protein BSUIS_B0013	Unknown (Prob.=0.25)	0.334	0	YTLPNPSQTL binds to H-2-Db More...	GNGGNVQQL binds to HLA-DRB11301 More...*
12	gi\|163844211\|ref\|YP_001621866.1\|	BSUIS_B0014	hypothetical protein BSUIS_B0014	Unknown (Prob.=0.2)	0.261	0	YSASKPLID binds to Patr-B0901 More...*	QWRRGQRFP binds to HLA-DRB11101 More...*
13	gi\|163844212\|ref\|YP_001621867.1\|	BSUIS_B0015	2,3-dihydroxybenzoate-2,3-dehydrogenase	Cytoplasmic (Prob.=0.997)	0.270	0	LLSQWVPVFR binds to HLA-A1101 More...*	AAYCASKAA binds to H-2-IAd More...	YES	YES
14	gi\|163844213\|ref\|YP_001621868.1\|	BSUIS_B0017	enterobactin synthase subunit E	Cytoplasmic (Prob.=0.926)	0.099	0	LTPQTRFL binds to Mamu-A01 More...*	SPTGAGEVA binds to H-2-IAg7 More...	YES	YES
15	gi\|163844214\|ref\|YP_001621869.1\|	BSUIS_B0018	isochorismate synthase	Cytoplasmic (Prob.=0.896)	0.146	0	MADPEADRK binds to HLA-A1 More...	ALQLACLIH binds to H-2-IEk More...
16	gi\|163844215\|ref\|YP_001621870.1\|	BSUIS_B0019	hypothetical protein BSUIS_B0019	Cytoplasmic (Prob.=0.896)	0.086	0	DGPVRLPIL binds to H-2-Dd More...	YIWYIRAHH binds to H-2-IAd More...
17	gi\|163844216\|ref\|YP_001621871.1\|	BSUIS_B0020	hypothetical protein BSUIS_B0020	Cytoplasmic Membrane (Prob.=0.916)	0.276	0	IQGGRGGYW binds to Mamu-B17 More...*	SKYVKSIEL binds to HLA-DR7 More...
18	gi\|163844217\|ref\|YP_001621872.1\|	BSUIS_B0021	hypothetical protein BSUIS_B0021	Cytoplasmic Membrane (Prob.=1)	0.325	4	LPRDFVEHL binds to HLA-B7 More...	WIWAASIFF binds to HLA-DRB11302 More...*
19	gi\|163844218\|ref\|YP_001621873.1\|	BSUIS_B0022	pentapeptide MXKDX repeat-containing protein	Unknown (Prob.=0.25)	0.515	1	SDNMSKDAM binds to Patr-B2401 More...*	PAAFAEDAM binds to H-2-IEg7 More...
20	gi\|163844219\|ref\|YP_001621874.1\|	BSUIS_B0023	sigma-70 family RNA polymerase sigma factor	Cytoplasmic (Prob.=0.896)	0.191	0	SERTAGLI binds to H-2-Kk More...	NAIARHKLV binds to H-2-IAd More...
21	gi\|163844220\|ref\|YP_001621875.1\|	BSUIS_B0024	hypothetical protein BSUIS_B0024	Cytoplasmic Membrane (Prob.=1)	0.288	6	FIALWYTLGI binds to HLA-A2 More...	AVLLPALFA binds to H-2-IAg7 More...
22	gi\|163844221\|ref\|YP_001621876.1\|	BSUIS_B0025	hypothetical protein BSUIS_B0025	Unknown (Prob.=0.2)	0.062	0	YAFHDAIVI binds to Mamu-B01 More...*	IATRAAGRA binds to HLA-DQA10301/DQB10 More...
23	gi\|163844222\|ref\|YP_001621877.1\|	BSUIS_B0026	hypothetical protein BSUIS_B0026	Periplasmic (Prob.=0.944)	0.606	0	RNKGKEVL binds to HLA-B8 More...	GLLYRAAVL binds to H-2-IAg7 More...
24	gi\|163844223\|ref\|YP_001621878.1\|	BSUIS_B0027	hypothetical protein BSUIS_B0027	Cytoplasmic Membrane (Prob.=1)	0.172	9	VSYPFYRL binds to H-2-Kb More...	VHAFGHAHE binds to HLA-DQA10301/DQB10 More...
25	gi\|163844224\|ref\|YP_001621879.1\|	BSUIS_B0028	hypothetical protein BSUIS_B0028	Cytoplasmic Membrane (Prob.=1)	0.358	10	SDYKALASA binds to Patr-B2401 More...*	LVAGWFSTK binds to HLA-DRB11301 More...*
26	gi\|163844225\|ref\|YP_001621880.1\|	BSUIS_B0029	hypothetical protein BSUIS_B0029	Cytoplasmic Membrane (Prob.=0.788)	0.134	0	RRYKVQFTF binds to HLA-B27 More...	SVLVYGEII binds to H-2-IAg7 More...	YES	YES
27	gi\|163844226\|ref\|YP_001621881.1\|	BSUIS_B0030	hypothetical protein BSUIS_B0030	Cytoplasmic Membrane (Prob.=0.788)	0.100	0	VPPTSGEVLL binds to HLA-B07 More...*	APKIVAVVG binds to H-2-IAg7 More...	YES	YES
28	gi\|163844227\|ref\|YP_001621882.1\|	BSUIS_B0031	hypothetical protein BSUIS_B0031	Unknown (Prob.=0.2)	0.143	0	ILERAGASY binds to HLA-A1 More...	IVQYDDIAA binds to H-2-IEg7 More...
29	gi\|163844228\|ref\|YP_001621883.1\|	BSUIS_B0032	hypothetical protein BSUIS_B0032	Cytoplasmic (Prob.=0.997)	0.436	0	SEIASVIAF binds to HLA-B44 More...	TIKADASSA binds to H-2-IEg7 More...	YES	YES
30	gi\|163844229\|ref\|YP_001621884.1\|	BSUIS_B0033	hypothetical protein BSUIS_B0033	Unknown (This protein may have multiple localization sites.) (Prob.=0.74)	0.336	0	SEVVDPVVF binds to HLA-B4001 More...*	GVAGRAAFD binds to HLA-DRB11301 More...*	YES	YES
31	gi\|163844230\|ref\|YP_001621885.1\|	BSUIS_B0034	hypothetical protein BSUIS_B0034	Cytoplasmic Membrane (Prob.=0.927)	0.134	0	IRTLAQRTL binds to HLA-B2705 More...*	QFLAKALGY binds to H-2-IAs More...	YES	YES
32	gi\|163844231\|ref\|YP_001621886.1\|	BSUIS_B0035	branched-chain alpha-keto acid dehydrogenase subunit E2	Cytoplasmic (Prob.=0.997)	0.155	0	MRRTIARRLL binds to HLA-B0702 More...*	ARENRLKPE binds to H-2-IEd More...	YES	YES
33	gi\|163844232\|ref\|YP_001621887.1\|	BSUIS_B0036	hypothetical protein BSUIS_B0036	Unknown (Prob.=0.2)	0.238	0	IIADPVHHV binds to HLA-A020101 More...*	GLKYAAAAL binds to H-2-IAg7 More...
34	gi\|163844233\|ref\|YP_001621888.1\|	BSUIS_B0037	hypothetical protein BSUIS_B0037	Unknown (Prob.=0.2)	0.413	0	RPRPVAIWK binds to Patr-B1301 More...*	PKYSQMSAR binds to HLA-DR1 More...
35	gi\|163844234\|ref\|YP_001621889.1\|	BSUIS_B0038	hypothetical protein BSUIS_B0038	Unknown (Prob.=0.2)	0.362	0	GVRGRIWQL binds to HLA-B8 More...	GVRGRIWQL binds to HLA-DRB11301 More...*
36	gi\|163844235\|ref\|YP_001621890.1\|	mgtA	magnesium-translocating P-type ATPase	Cytoplasmic Membrane (Prob.=1)	0.272	8	SWLLIRFMLI binds to Patr-A0901 More...*	SVLVASAFI binds to H-2-IAg7 More...	YES	YES
37	gi\|163844236\|ref\|YP_001621891.1\|	BSUIS_B0040	hypothetical protein BSUIS_B0040	Unknown (Prob.=0.2)	0.093	1	SPRRRGEPPL binds to HLA-B7 More...	LWQWMKGRM binds to HLA-DR1 More...
38	gi\|163844237\|ref\|YP_001621892.1\|	BSUIS_B0041	hypothetical protein BSUIS_B0041	Unknown (Prob.=0.25)	0.407	1	ATYLILFAL binds to HLA-B1402 More...*	IAVATYLIL binds to H-2-IAs More...
39	gi\|163844238\|ref\|YP_001621893.1\|	BSUIS_B0042	hypothetical protein BSUIS_B0042	Cytoplasmic Membrane (Prob.=0.946)	0.247	4	EAQVRALL binds to HLA-B8 More...	HAAVATVFI binds to H-2-IAg7 More...
40	gi\|163844239\|ref\|YP_001621894.1\|	BSUIS_B0043	hypothetical protein BSUIS_B0043	Cytoplasmic Membrane (Prob.=1)	0.316	3	VESSGGTI binds to H-2-Kk More...	GLKLVSAEI binds to H-2-IAg7 More...
41	gi\|163844240\|ref\|YP_001621895.1\|	BSUIS_B0044	hypothetical protein BSUIS_B0044	Cytoplasmic (Prob.=0.997)	0.098	0	TEFHARMKGL binds to HLA-B4001 More...*	ASVNEFLKH binds to H-2-IAs More...
42	gi\|163844241\|ref\|YP_001621896.1\|	BSUIS_B0046	hypothetical protein BSUIS_B0046	Cytoplasmic (Prob.=0.896)	0.125	0	RLQEEPFSL binds to HLA-A020101 More...*	KIMFITGFA binds to HLA-DPB10401 More...*	YES
43	gi\|163844242\|ref\|YP_001621897.1\|	BSUIS_B0047	hypothetical protein BSUIS_B0047	Unknown (Prob.=0.2)	0.000	0	KPATLASLL binds to Patr-B1301 More...*	WKHIVFMIA binds to HLA-DRB10401 More...*
44	gi\|163844243\|ref\|YP_001621898.1\|	BSUIS_B0048	hypothetical protein BSUIS_B0048	Unknown (Prob.=0.2)	0.196	0	DPRMFAEPL binds to HLA-B7 More...	EALCVALHH binds to H-2-IAd More...
45	gi\|163844244\|ref\|YP_001621899.1\|	BSUIS_B0049	histidinol-phosphate phosphatase	Unknown (Prob.=0.2)	0.367	0	SEVAAAAAA binds to HLA-B44 More...	SRYGVDCYA binds to H-2-IEk More...	YES	YES
46	gi\|163844245\|ref\|YP_001621900.1\|	BSUIS_B0050	hypothetical protein BSUIS_B0050	Cytoplasmic Membrane (Prob.=1)	0.271	0	YADDLDHFL binds to Patr-B0101 More...*	LGGPTVRWV binds to HLA-DRB11301 More...*
47	gi\|163844246\|ref\|YP_001621901.1\|	BSUIS_B0051	hypothetical protein BSUIS_B0051	Unknown (Prob.=0.2)	0.650	0	NGPCSGCFL binds to H-2-Dd More...	GTQINCSLQ binds to H-2-IAk More...
48	gi\|163844247\|ref\|YP_001621902.1\|	BSUIS_B0052	hypothetical protein BSUIS_B0052	Unknown (Prob.=0.25)	0.304	0	GLRVQIQYY binds to HLA-A3 More...	TLAADNGLR binds to H-2-IEg7 More...
49	gi\|163844248\|ref\|YP_001621903.1\|	BSUIS_B0053	hypothetical protein BSUIS_B0053	Unknown (Prob.=0.2)	0.227	0	FERSPKMMFI binds to Mamu-A11 More...*	PLWIRSCYA binds to HLA-DRB10101 More...*
50	gi\|163844249\|ref\|YP_001621904.1\|	BSUIS_B0054	hypothetical protein BSUIS_B0054	Unknown (Prob.=0.2)	0.395	0	APGPGIEY binds to HLA-B3501 More...*	ELLRKVTWC binds to HLA-DRB40101 More...*

Filter Analysis Results
Select Subcellular Localization
Maximum Number of Transmembrane Helices
Minimum Adhesin Probability (0-1.0)
P Value Cutoff
No Similarity to Human Protein
No Similarity to Mouse Protein
MHC Class I & II Epitope Prediction by Vaxitope:
MHC Host Species
MHC Allele
Epitope Length
help