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Vaxign: Vaccine Target Prediction and Design

Query ID	Submitted at	Status
RTJPP4ATXW	2009-11-15 08:49:05	All steps finished at: 2009-11-15 14:49:39

Found 3044 protein(s).

Record: 1 to 50 of 3044 Records.

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#	Sequence ID	Gene Symbol	Protein Note	Localization (Probability)	Adhesin Probability	Trans-membrane helices	MHC I Binding	MHC II Binding	Similar Human Protein	Similar Mouse Protein
1	BAUG_0000T0		| BAUG_0000 | Brucella abortus NCTC 8038 N-acetylglucosamine kinase (translation) (294 aa)	Unknown (Prob.=0.2)	0.000	0	FEYVAKGDPL binds to HLA-B*4001 More...	HAGGARLGR binds to H-2-IAs More...
2	BAUG_0001T0		| BAUG_0001 | Brucella abortus NCTC 8038 RRF2 family protein (translation) (144 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	FLDNIFTEL binds to HLA-A*0201 More...	KGGGFCLAH binds to HLA-DRB1*1301 More...
3	BAUG_0002T0		| BAUG_0002 | Brucella abortus NCTC 8038 cobalamin synthesis protein/P47K (translation) (401 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	SDGARLDTM binds to Patr-B*2401 More...	KGFFWLATR binds to HLA-DPB1*0401 More...	YES	YES
4	BAUG_0003T0		| BAUG_0003 | Brucella abortus NCTC 8038 periplasmic solute binding protein (translation) (335 aa)	Periplasmic (Prob.=0.976)	0.000	0	GEYDLHFWL binds to HLA-B*4001 More...	FEAHDHGHG binds to HLA-DQA1*0301/DQB1*0 More...
5	BAUG_0004T0		| BAUG_0004 | Brucella abortus NCTC 8038 zinc import ATP-binding protein znuC (translation) (299 aa)	Cytoplasmic (Prob.=0.912)	0.000	0	SSPEYVRL binds to Mamu-A*01 More...	HHDHEHHHH binds to H-2-IAd More...	YES	YES
6	BAUG_0005T0		| BAUG_0005 | Brucella abortus NCTC 8038 ABC transporter, family 3 (translation) (285 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	7	VLMAFMTWV binds to HLA-A*0201 More...	GDILAVSRI binds to HLA-DRB1*0301 More...
7	BAUG_0006T0		| BAUG_0006 | Brucella abortus NCTC 8038 ferric-uptake regulator (translation) (146 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	QTLVFDVLSK binds to HLA-A11 More...	MTTHHHHHA binds to H-2-IAd More...
8	BAUG_0007T0		| BAUG_0007 | Brucella abortus NCTC 8038 type IV pilus assembly PilZ (translation) (112 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RREERQRTR binds to HLA-B*2705 More...	DHYARALLA binds to HLA-DQA1*0301/DQB1*0 More...
9	BAUG_0008T0		| BAUG_0008 | Brucella abortus NCTC 8038 conserved hypothetical protein (translation) (176 aa)	Unknown (Prob.=0.2)	0.000	2	KKLTVPLEY binds to Patr-B*0901 More...	KFYGSYSDT binds to HLA-DRB1*0701 More...
10	BAUG_0009T0		| BAUG_0009 | Brucella abortus NCTC 8038 conserved hypothetical protein (translation) (159 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	AEINARKSR binds to HLA-B44 More...	NMQSARLGH binds to H-2-IAd More...
11	BAUG_0010T0		| BAUG_0010 | Brucella abortus NCTC 8038 flagellar protein FlgJ (translation) (197 aa)	Unknown (Prob.=0.25)	0.000	0	FEAFMLQSFV binds to Mamu-A*11 More...	YWKSMMAEA binds to HLA-DR1 More...
12	BAUG_0011T0		| BAUG_0011 | Brucella abortus NCTC 8038 tropomyosin (translation) (136 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	EAALAIANA binds to HLA-B*1402 More...	DEERAALIA binds to H-2-IEk More...
13	BAUG_0012T0		| BAUG_0012 | Brucella abortus NCTC 8038 flagellar biosynthesis protein FliR (translation) (256 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	6	VYFISMPFVL binds to HLA-A*2402 More...	IYFWALQFM binds to HLA-DPB1*0401 More...
14	BAUG_0013T0		| BAUG_0013 | Brucella abortus NCTC 8038 flagellar biosynthesis protein flhA (translation) (483 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	5	EAQRRRREL binds to HLA-B*1402 More...	KKQREAEEQ binds to HLA-DPB1*0901 More...
15	BAUG_0014T0		| BAUG_0014 | Brucella abortus NCTC 8038 flagellar biosynthetic protein FliQ (translation) (89 aa)	Unknown (Prob.=0.25)	0.000	2	VPKIIVIF binds to HLA-B*3501 More...	VPKIIVIFV binds to H-2-IAg7 More...
16	BAUG_0015T0		| BAUG_0015 | Brucella abortus NCTC 8038 flagellar hook capping protein (translation) (138 aa)	Unknown (Prob.=0.2)	0.000	0	ASVDYDSFL binds to Patr-B*0101 More...	LKLLVTQMQ binds to HLA-DPB1*0401 More...
17	BAUG_0016T0		| BAUG_0016 | Brucella abortus NCTC 8038 flbT protein (translation) (153 aa)	Unknown (Prob.=0.2)	0.000	0	AEILNALKL binds to HLA-B44 More...	QLYFAAQMM binds to HLA-DRB1*0101 More...
18	BAUG_0017T0		| BAUG_0017 | Brucella abortus NCTC 8038 flagellar biosynthesis regulatory protein FlaF (translation) (115 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	FTSKLWTTI binds to Patr-B*0101 More...	SIAMLEAAR binds to H-2-IEg7 More...
19	BAUG_0018T0		| BAUG_0018 | Brucella abortus NCTC 8038 flagellar hook-associated protein (translation) (349 aa)	Unknown (Prob.=0.2)	0.000	0	DAATRVNAL binds to HLA-B*1402 More...	EAATTRIAA binds to H-2-IAd More...
20	BAUG_0019T0		| BAUG_0019 | Brucella abortus NCTC 8038 flagellar hook-associated protein (translation) (485 aa)	Outer Membrane (Prob.=0.949)	0.000	0	FETTARKV binds to H-2-Kk More...	RQKANSEFT binds to HLA-DRB1*1302 More...
21	BAUG_0020T0		| BAUG_0020 | Brucella abortus NCTC 8038 trypsin inhibitor Kunitz (translation) (397 aa)	Outer Membrane (Prob.=0.949)	0.000	0	SYNDKGEKI binds to H-2-Kd More...	SYTANSKVF binds to HLA-DRB1*1302 More...
22	BAUG_0021T0		| BAUG_0021 | Brucella abortus NCTC 8038 response regulator receiver (translation) (228 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	ARINAIRRR binds to HLA-B*2705 More...	GYSSWFGRE binds to HLA-DPB1*0401 More...
23	BAUG_0022T0		| BAUG_0022 | Brucella abortus NCTC 8038 lytic transglycosylase catalytic (translation) (191 aa)	Unknown (Prob.=0.25)	0.000	0	WTPQARSF binds to Mamu-A*01 More...	WTMAVARYH binds to H-2-IAd More...
24	BAUG_0023T0		| BAUG_0023 | Brucella abortus NCTC 8038 flagellar hook-length control protein (translation) (425 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	VVDPAGIDK binds to HLA-A1 More...	NAQGAAQHV binds to H-2-IAd More...
25	BAUG_0024T0		| BAUG_0024 | Brucella abortus NCTC 8038 chemotaxis motc protein (translation) (431 aa)	Periplasmic (Prob.=0.976)	0.000	0	SRNYLQRFR binds to HLA-B*2705 More...	AAETVGAIV binds to H-2-IAg7 More...
26	BAUG_0025T0		| BAUG_0025 | Brucella abortus NCTC 8038 OmpA/MotB domain-containing protein (translation) (367 aa)	Cytoplasmic Membrane (Prob.=0.802)	0.000	0	ASYFNPVKL binds to H-2-Kb More...	IIVRRGGHD binds to HLA-DQA1*0301/DQB1*0 More...
27	BAUG_0026T0		| BAUG_0026 | Brucella abortus NCTC 8038 conserved hypothetical protein (translation) (227 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	AEMAAVIAL binds to HLA-B44 More...	VIALEEEKR binds to H-2-IEg7 More...
28	BAUG_0027T0		| BAUG_0027 | Brucella abortus NCTC 8038 flagellar M-ring protein FliF (translation) (581 aa)	Cytoplasmic Membrane (Prob.=0.998)	0.000	2	TTPPPANFV binds to Mamu-A*01 More...	MIEMDEERV binds to H-2-IEg7 More...
29	BAUG_0028T0		| BAUG_0028 | Brucella abortus NCTC 8038 flagellin (translation) (283 aa)	Periplasmic (Prob.=0.944)	0.000	0	LESTQNRI binds to H-2-Kk More...	SNANYAGSN binds to H-2-IEk More...
30	BAUG_0029T0		| BAUG_0029 | Brucella abortus NCTC 8038 outer membrane autotransporter (translation) (3423 aa)	Unknown (This protein may have multiple localization sites.) (Prob.=0.587)	0.000	0	SDYTGKTTI binds to Patr-B*2401 More...	TIANALYAR binds to H-2-IEg7 More...
31	BAUG_0030T0		| BAUG_0030 | Brucella abortus NCTC 8038 saccharopine dehydrogenase (translation) (352 aa)	Cytoplasmic Membrane (Prob.=0.946)	0.000	0	DCIAAALKA binds to HLA-B44 More...	SAKAAGIVI binds to H-2-IAg7 More...	YES	YES
32	BAUG_0031T0		| BAUG_0031 | Brucella abortus NCTC 8038 D-xylose ABC transporter (translation) (340 aa)	Periplasmic (Prob.=0.976)	0.000	1	FIAAAEKL binds to H-2-Kd More...	KLIAEEAAK binds to HLA-DPB1*0901 More...
33	BAUG_0032T0		| BAUG_0032 | Brucella abortus NCTC 8038 xylose import ATP-binding protein xylG (translation) (512 aa)	Cytoplasmic Membrane (Prob.=0.788)	0.000	0	TTPDIITMM binds to Mamu-A*01 More...	NGVKALDGI binds to HLA-DRB1*0301 More...	YES	YES
34	BAUG_0033T0		| BAUG_0033 | Brucella abortus NCTC 8038 bacterial inner-membrane translocator (translation) (390 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	10	VLVLLVILGV binds to HLA-A2.1 More...	LTTTARLAA binds to H-2-IAd More...
35	BAUG_0034T0		| BAUG_0034 | Brucella abortus NCTC 8038 helix-turn-helix domain-containing protein (translation) (323 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	WRAISYDQW binds to Mamu-B*17 More...	AHMLHALIA binds to H-2-IAd More...
36	BAUG_0035T0		| BAUG_0035 | Brucella abortus NCTC 8038 aldehyde dehydrogenase (translation) (469 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	ITPWNWPVM binds to Mamu-A*01 More...	IYDDVCRHL binds to H-2-IAk More...	YES	YES
37	BAUG_0036T0		| BAUG_0036 | Brucella abortus NCTC 8038 HpcH/HpaI aldolase (translation) (270 aa)	Unknown (Prob.=0.2)	0.000	0	VRPPVGETW binds to Mamu-B*17 More...	RNQFKAALK binds to HLA-DPB1*0901 More...
38	BAUG_0037T0		| BAUG_0037 | Brucella abortus NCTC 8038 hydratase/decarboxylase (translation) (268 aa)	Unknown (Prob.=0.2)	0.000	0	LNHPARGIVW binds to Mamu-B*17 More...	QIVLAGSFI binds to HLA-DRB1*1302 More...
39	BAUG_0038T0		| BAUG_0038 | Brucella abortus NCTC 8038 fumarylacetoacetate hydrolase (translation) (289 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	DALDHIAAL binds to HLA-B*1402 More...	GKGGRRIAE binds to HLA-DRB1*1301 More...	YES	YES
40	BAUG_0039T0		| BAUG_0039 | Brucella abortus NCTC 8038 homoprotocatechuate 2,3-dioxygenase (translation) (327 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	AEHFFKGKGL binds to HLA-B*4001 More...	GRLWAAWTH binds to H-2-IEk More...
41	BAUG_0040T0		| BAUG_0040 | Brucella abortus NCTC 8038 aldehyde dehydrogenase (translation) (505 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	ITPWNTPFML binds to Mamu-A*01 More...	FANAAHAIA binds to H-2-IAd More...	YES	YES
42	BAUG_0041T0		| BAUG_0041 | Brucella abortus NCTC 8038 5-carboxymethyl-2-hydroxymuconate isomerase (translation) (131 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	APLFATPHF binds to Patr-B*1301 More...	AEAYAVADL binds to H-2-IAg7 More...
43	BAUG_0042T0		| BAUG_0042 | Brucella abortus NCTC 8038 bacterial regulatory protein (translation) (164 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	ITPAGLAII binds to Mamu-A*01 More...	MAERAFILA binds to H-2-IEk More...
44	BAUG_0043T0		| BAUG_0043 | Brucella abortus NCTC 8038 aminoglycoside phosphotransferase (translation) (331 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RPAWDVAGLL binds to HLA-B*07 More...	YVADVRAVV binds to H-2-IAg7 More...
45	BAUG_0044T0		| BAUG_0044 | Brucella abortus NCTC 8038 4-aminobutyrate aminotransferase (translation) (391 aa)	Unknown (Prob.=0.2)	0.000	0	FLAPAVAAV binds to HLA-A2 More...	KLRRQRWPR binds to Mamu-DRB*w201 More...	YES	YES
46	BAUG_0045T0		| BAUG_0045 | Brucella abortus NCTC 8038 aminotransferase (translation) (453 aa)	Cytoplasmic Membrane (Prob.=0.916)	0.000	0	YPYRNPFNM binds to H-2-Ld More...	HPVGAAAAL binds to H-2-IAg7 More...	YES	YES
47	BAUG_0046T0		| BAUG_0046 | Brucella abortus NCTC 8038 hydrolase (translation) (215 aa)	Unknown (Prob.=0.2)	0.000	0	RPAESYAQAL binds to HLA-B7 More...	KKNIEGAEA binds to HLA-DPB1*0901 More...	YES	YES
48	BAUG_0047T0		| BAUG_0047 | Brucella abortus NCTC 8038 N-6 Adenine-specific DNA methylase (translation) (419 aa)	Unknown (Prob.=0.2)	0.000	0	GLYGLNPI binds to HLA-A*0201 More...	YHAHNRLIA binds to H-2-IAd More...
49	BAUG_0048T0		| BAUG_0048 | Brucella abortus NCTC 8038 bacterial regulatory protein (translation) (261 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	FLGTALPFV binds to HLA-A2 More...	TIADPEDVR binds to H-2-IEg7 More...
50	BAUG_0049T0		| BAUG_0049 | Brucella abortus NCTC 8038 amino acid permease (translation) (484 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	12	TTRVLPLVT binds to Patr-B*0901 More...	TTIYSEEAR binds to H-2-IEg7 More...

Filter Analysis Results
Select Subcellular Localization	Any Localization Cellwall Cytoplasmic Cytoplasmic Membrane Extracellular Outer Membrane Periplasmic Unknown
Maximum Number of Transmembrane Helices
Minimum Adhesin Probability (0-1.0)
P Value Cutoff
No Similarity to Human Protein
No Similarity to Mouse Protein
MHC Class I & II Epitope Prediction by Vaxitope:
MHC Host Species	any species chimpanzee human macaque mouse
MHC Allele
Epitope Length
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