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Vaxign: Vaccine Target Prediction and Design

Query ID	Submitted at	Status
SMK34432MN	2009-11-15 08:48:16	All steps finished at: 2009-11-15 15:02:22

Found 3223 protein(s).

Record: 1 to 50 of 3223 Records.

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#	Sequence ID	Gene Symbol	Protein Note	Localization (Probability)	Adhesin Probability	Trans-membrane helices	MHC I Binding	MHC II Binding	Similar Human Protein	Similar Mouse Protein
1	BATG_00001T0		| BATG_00001 | Brucella sp. F5/99 N-acetylglucosamine kinase (translation) (294 aa)	Unknown (Prob.=0.2)	0.000	0	FEYVAKGDPL binds to HLA-B*4001 More...	HAGGARLGR binds to H-2-IAs More...
2	BATG_00002T0		| BATG_00002 | Brucella sp. F5/99 RRF2 family protein (translation) (144 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	FLDNIFTEL binds to HLA-A*0201 More...	KGGGFCLAH binds to HLA-DRB1*1301 More...
3	BATG_00003T0		| BATG_00003 | Brucella sp. F5/99 cobalamin synthesis protein/P47K (translation) (401 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	SDGARLDTM binds to Patr-B*2401 More...	KGFFWLATR binds to HLA-DPB1*0401 More...	YES	YES
4	BATG_00004T0		| BATG_00004 | Brucella sp. F5/99 high-affinity zinc uptake system protein znuA (translation) (335 aa)	Periplasmic (Prob.=0.976)	0.000	0	GEYDLHFWL binds to HLA-B*4001 More...	FEAHDHGHG binds to HLA-DQA1*0301/DQB1*0 More...
5	BATG_00005T0		| BATG_00005 | Brucella sp. F5/99 zinc import ATP-binding protein znuC (translation) (299 aa)	Cytoplasmic (Prob.=0.912)	0.000	0	SSPEYVRL binds to Mamu-A*01 More...	HHDHEHHHH binds to H-2-IAd More...	YES	YES
6	BATG_00006T0		| BATG_00006 | Brucella sp. F5/99 ABC transporter (translation) (287 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	7	VLMAFMTWV binds to HLA-A*0201 More...	GDILAVSRI binds to HLA-DRB1*0301 More...
7	BATG_00007T0		| BATG_00007 | Brucella sp. F5/99 ferric-uptake regulator (translation) (146 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	QTLVFDVLSK binds to HLA-A11 More...	MTTHHHHHA binds to H-2-IAd More...
8	BATG_00008T0		| BATG_00008 | Brucella sp. F5/99 type IV pilus assembly PilZ (translation) (112 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RREERQRTR binds to HLA-B*2705 More...	DHYARALLA binds to HLA-DQA1*0301/DQB1*0 More...
9	BATG_00009T0		| BATG_00009 | Brucella sp. F5/99 conserved hypothetical protein (translation) (108 aa)	Unknown (Prob.=0.2)	0.000	0	KKLTVPLEY binds to Patr-B*0901 More...	KFYGSYSDT binds to HLA-DRB1*0701 More...
10	BATG_00010T0		| BATG_00010 | Brucella sp. F5/99 conserved hypothetical protein (translation) (159 aa)	Unknown (Prob.=0.2)	0.000	0	AEINARKSR binds to HLA-B44 More...	NMQSARLGH binds to H-2-IAd More...
11	BATG_00011T0		| BATG_00011 | Brucella sp. F5/99 flagellar protein FlgJ (translation) (197 aa)	Unknown (Prob.=0.25)	0.000	0	FEAFMLQSFV binds to Mamu-A*11 More...	YWKSMMAEA binds to HLA-DR1 More...
12	BATG_00012T0		| BATG_00012 | Brucella sp. F5/99 tropomyosin (translation) (136 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	EAALAIANA binds to HLA-B*1402 More...	DEERAALIA binds to H-2-IEk More...
13	BATG_00013T0		| BATG_00013 | Brucella sp. F5/99 flagellar biosynthesis protein FliR (translation) (256 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	6	VYFISMPFVL binds to HLA-A*2402 More...	IYFWALQFM binds to HLA-DPB1*0401 More...
14	BATG_00014T0		| BATG_00014 | Brucella sp. F5/99 flagellar biosynthesis protein flhA (translation) (702 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	8	EAQRRRREL binds to HLA-B*1402 More...	KKQREAEEQ binds to HLA-DPB1*0901 More...
15	BATG_00015T0		| BATG_00015 | Brucella sp. F5/99 flagellar biosynthetic protein FliQ (translation) (89 aa)	Unknown (Prob.=0.25)	0.000	2	VPKIIVIF binds to HLA-B*3501 More...	VPKIIVIFV binds to H-2-IAg7 More...
16	BATG_00016T0		| BATG_00016 | Brucella sp. F5/99 flagellar hook capping protein (translation) (138 aa)	Unknown (Prob.=0.2)	0.000	0	ASVDYDSFL binds to Patr-B*0101 More...	LKLLVTQMQ binds to HLA-DPB1*0401 More...
17	BATG_00017T0		| BATG_00017 | Brucella sp. F5/99 flbT protein (translation) (153 aa)	Unknown (Prob.=0.2)	0.000	0	AEILNALKL binds to HLA-B44 More...	QLYFAAQMM binds to HLA-DRB1*0101 More...
18	BATG_00018T0		| BATG_00018 | Brucella sp. F5/99 flagellar biosynthesis regulatory protein FlaF (translation) (115 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	FTSKLWTTI binds to Patr-B*0101 More...	SIAMLEVAR binds to H-2-IEg7 More...
19	BATG_00019T0		| BATG_00019 | Brucella sp. F5/99 flagellar hook-associated protein (translation) (349 aa)	Unknown (Prob.=0.2)	0.000	0	DAATRVNAL binds to HLA-B*1402 More...	EAATTRIAA binds to H-2-IAd More...
20	BATG_00020T0		| BATG_00020 | Brucella sp. F5/99 flagellar hook-associated protein (translation) (383 aa)	Outer Membrane (Prob.=0.949)	0.000	0	FETTARKV binds to H-2-Kk More...	YKYNVQGAA binds to HLA-DR4 More...
21	BATG_00021T0		| BATG_00021 | Brucella sp. F5/99 trypsin inhibitor Kunitz (translation) (397 aa)	Outer Membrane (Prob.=0.949)	0.000	0	SYNDKGEKI binds to H-2-Kd More...	SYTANSKVF binds to HLA-DRB1*1302 More...
22	BATG_00022T0		| BATG_00022 | Brucella sp. F5/99 response regulator receiver (translation) (228 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	ARINAIRRR binds to HLA-B*2705 More...	GYSSWFGRE binds to HLA-DPB1*0401 More...
23	BATG_00023T0		| BATG_00023 | Brucella sp. F5/99 lytic transglycosylase catalytic (translation) (191 aa)	Unknown (Prob.=0.25)	0.000	0	WTPQARSF binds to Mamu-A*01 More...	WTMAVARYH binds to H-2-IAd More...
24	BATG_00024T0		| BATG_00024 | Brucella sp. F5/99 flagellar hook-length control protein (translation) (425 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	VVDPAGIDK binds to HLA-A1 More...	NAQGAAQHV binds to H-2-IAd More...
25	BATG_00025T0		| BATG_00025 | Brucella sp. F5/99 chemotaxis motc protein (translation) (431 aa)	Periplasmic (Prob.=0.976)	0.000	0	SRNYLQRFR binds to HLA-B*2705 More...	AAETVGAIV binds to H-2-IAg7 More...
26	BATG_00026T0		| BATG_00026 | Brucella sp. F5/99 OmpA/MotB domain-containing protein (translation) (367 aa)	Cytoplasmic Membrane (Prob.=0.802)	0.000	0	ASYFNPVKL binds to H-2-Kb More...	IIVRRGGHD binds to HLA-DQA1*0301/DQB1*0 More...
27	BATG_00027T0		| BATG_00027 | Brucella sp. F5/99 conserved hypothetical protein (translation) (227 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	AEMAAVIAL binds to HLA-B44 More...	VIALEEEKR binds to H-2-IEg7 More...
28	BATG_00028T0		| BATG_00028 | Brucella sp. F5/99 flagellar M-ring protein FliF (translation) (581 aa)	Cytoplasmic Membrane (Prob.=0.998)	0.000	2	TTPPPANFV binds to Mamu-A*01 More...	MIEMDEERV binds to H-2-IEg7 More...
29	BATG_00029T0		| BATG_00029 | Brucella sp. F5/99 flagellin (translation) (283 aa)	Periplasmic (Prob.=0.944)	0.000	0	LESTQNRI binds to H-2-Kk More...	SNANYAGSN binds to H-2-IEk More...
30	BATG_00030T0		| BATG_00030 | Brucella sp. F5/99 outer membrane autotransporter (translation) (3421 aa)	Unknown (This protein may have multiple localization sites.) (Prob.=0.587)	0.000	0	SDYTGKTTI binds to Patr-B*2401 More...	TIANALYAR binds to H-2-IEg7 More...
31	BATG_00031T0		| BATG_00031 | Brucella sp. F5/99 saccharopine dehydrogenase (translation) (352 aa)	Cytoplasmic Membrane (Prob.=0.946)	0.000	0	DCIAAALKA binds to HLA-B44 More...	SAKAAGIVI binds to H-2-IAg7 More...	YES	YES
32	BATG_00032T0		| BATG_00032 | Brucella sp. F5/99 D-xylose ABC transporter (translation) (340 aa)	Periplasmic (Prob.=0.976)	0.000	1	FIAAAEKL binds to H-2-Kd More...	KLIAEEAAK binds to HLA-DPB1*0901 More...
33	BATG_00033T0		| BATG_00033 | Brucella sp. F5/99 xylose import ATP-binding protein xylG (translation) (512 aa)	Cytoplasmic Membrane (Prob.=0.788)	0.000	0	TTPDIITMM binds to Mamu-A*01 More...	NGVKALDGI binds to HLA-DRB1*0301 More...	YES	YES
34	BATG_00034T0		| BATG_00034 | Brucella sp. F5/99 bacterial inner-membrane translocator (translation) (393 aa)	Cytoplasmic Membrane (Prob.=1)	0.000	10	VLVLLVILGV binds to HLA-A2.1 More...	LTTTARLAA binds to H-2-IAd More...
35	BATG_00035T0		| BATG_00035 | Brucella sp. F5/99 predicted protein (translation) (68 aa)	Unknown (Prob.=0.2)	0.000	0	RLYRHSINK binds to HLA-A*0301 More...	AIVLNNRFL binds to HLA-DRB1*1302 More...
36	BATG_00036T0		| BATG_00036 | Brucella sp. F5/99 helix-turn-helix domain-containing protein (translation) (323 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	WRAISYDQW binds to Mamu-B*17 More...	AHMLHALIA binds to H-2-IAd More...
37	BATG_00037T0		| BATG_00037 | Brucella sp. F5/99 aldehyde dehydrogenase (translation) (469 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	ITPWNWPVM binds to Mamu-A*01 More...	IYDDVCRHL binds to H-2-IAk More...	YES	YES
38	BATG_00038T0		| BATG_00038 | Brucella sp. F5/99 HpcH/HpaI aldolase (translation) (270 aa)	Unknown (Prob.=0.2)	0.000	0	VRPPVGETW binds to Mamu-B*17 More...	RNQFKAALK binds to HLA-DPB1*0901 More...
39	BATG_00039T0		| BATG_00039 | Brucella sp. F5/99 hydratase/decarboxylase (translation) (268 aa)	Unknown (Prob.=0.2)	0.000	0	LNHPARGIVW binds to Mamu-B*17 More...	QIVLAGSFI binds to HLA-DRB1*1302 More...
40	BATG_00040T0		| BATG_00040 | Brucella sp. F5/99 fumarylacetoacetate hydrolase (translation) (288 aa)	Unknown (Prob.=0.2)	0.000	0	DALDHIAAL binds to HLA-B*1402 More...	GKGGRRIAE binds to HLA-DRB1*1301 More...	YES	YES
41	BATG_00041T0		| BATG_00041 | Brucella sp. F5/99 homoprotocatechuate 2,3-dioxygenase (translation) (327 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	AEHFFKGKGL binds to HLA-B*4001 More...	GRLWAAWTH binds to H-2-IEk More...
42	BATG_00042T0		| BATG_00042 | Brucella sp. F5/99 aldehyde dehydrogenase (translation) (505 aa)	Cytoplasmic (Prob.=0.997)	0.000	0	ITPWNTPFML binds to Mamu-A*01 More...	FANAAHAIA binds to H-2-IAd More...	YES	YES
43	BATG_00043T0		| BATG_00043 | Brucella sp. F5/99 5-carboxymethyl-2-hydroxymuconate isomerase (translation) (131 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	APLFATPHF binds to Patr-B*1301 More...	AEAYAVADL binds to H-2-IAg7 More...
44	BATG_00044T0		| BATG_00044 | Brucella sp. F5/99 bacterial regulatory protein (translation) (164 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	ITPAGLAII binds to Mamu-A*01 More...	MAERAFILA binds to H-2-IEk More...
45	BATG_00045T0		| BATG_00045 | Brucella sp. F5/99 aminoglycoside phosphotransferase (translation) (349 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	RPAWDVAGLL binds to HLA-B*07 More...	CFPRWMMFW binds to HLA-DRB4*0101 More...
46	BATG_00046T0		| BATG_00046 | Brucella sp. F5/99 4-aminobutyrate aminotransferase (translation) (428 aa)	Unknown (Prob.=0.2)	0.000	0	FSRENADLM binds to H-2-Db More...	EAFAQAWAA binds to H-2-IAd More...	YES	YES
47	BATG_00047T0		| BATG_00047 | Brucella sp. F5/99 aminotransferase class-III (translation) (453 aa)	Cytoplasmic Membrane (Prob.=0.916)	0.000	0	YPYRNPFNM binds to H-2-Ld More...	HPVGAAAAL binds to H-2-IAg7 More...	YES	YES
48	BATG_00048T0		| BATG_00048 | Brucella sp. F5/99 hydrolase (translation) (215 aa)	Unknown (Prob.=0.2)	0.000	0	RPAESYAQAL binds to HLA-B7 More...	KKNIEGAEA binds to HLA-DPB1*0901 More...	YES	YES
49	BATG_00049T0		| BATG_00049 | Brucella sp. F5/99 N-6 Adenine-specific DNA methylase (translation) (417 aa)	Unknown (Prob.=0.2)	0.000	0	GLYGLNPI binds to HLA-A*0201 More...	YHAHNRLIA binds to H-2-IAd More...
50	BATG_00050T0		| BATG_00050 | Brucella sp. F5/99 bacterial regulatory protein (translation) (261 aa)	Cytoplasmic (Prob.=0.896)	0.000	0	FLGTALPFV binds to HLA-A2 More...	TIADPEEVR binds to H-2-IEg7 More...

Filter Analysis Results
Select Subcellular Localization	Any Localization Cellwall Cytoplasmic Cytoplasmic Membrane Extracellular Outer Membrane Periplasmic Unknown
Maximum Number of Transmembrane Helices
Minimum Adhesin Probability (0-1.0)
P Value Cutoff
No Similarity to Human Protein
No Similarity to Mouse Protein
MHC Class I & II Epitope Prediction by Vaxitope:
MHC Host Species	any species chimpanzee human macaque mouse
MHC Allele
Epitope Length
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