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Vaxign Statistics

Currently, Vaxign includes 254 precomputed genomes:

Index Pathogen Strain Refseq Accession No. of proteins
Bacillus anthracis (3)
1 Bacillus anthracis str. 'Ames Ancestor' NC_007323, NC_007322(pX01), NC_007323(pX02) 5584
2 Bacillus anthracis str. Ames NC_007530 5311
3 Bacillus anthracis str. Sterne NC_005945 5287
Brucella (31)
4 Brucella abortus 2308 NC_007618 (Chr I), NC_007624 (Chr II) 3034
5 Brucella abortus biovar 1 str. 9-941 NC_006932 (Chr I), NC_006933 (Chr II) 3085
6 Brucella abortus bv. 2 str. 86/8/59 3233
7 Brucella abortus bv. 3 str. Tulya 3261
8 Brucella abortus bv. 4 str. 292 3219
9 Brucella abortus bv. 6 str. 870 3219
10 Brucella abortus bv. 9 str. C68 3192
11 Brucella abortus NCTC 8038 3044
12 Brucella abortus S19 NC_010742 (Chr I), NC_010740 (Chr II) 3000
13 Brucella canis ATCC 23365 3251
14 Brucella ceti B1/94 3189
15 Brucella ceti M13/05/1 3230
16 Brucella ceti M490/95/1 3208
17 Brucella ceti M644/93/1 3243
18 Brucella melitensis 16M NC_003317 (Chr I), NC_003318 (Chr II) 3198
19 Brucella melitensis ATCC 23457 3136
20 Brucella melitensis bv. 1 str. Rev.1 3221
21 Brucella melitensis bv. 2 str. 63/9 3209
22 Brucella melitensis bv. 3 str. Ether 3239
23 Brucella microti CCM 4915 3282
24 Brucella neotomae 5K33 3217
25 Brucella ovis ATCC 25840 2890
26 Brucella pinnipedialis B2/94 3290
27 Brucella pinnipedialis M163/99/10 3296
28 Brucella pinnipedialis M292/94/1 3237
29 Brucella sp. F5/99 3223
30 Brucella suis 1330 NC_004310 (Chr I), NC_004311 (Chr II) 3271
31 Brucella suis ATCC 23445 3241
32 Brucella suis bv. 3 str. 686 3230
33 Brucella suis bv. 4 str. 40 3054
34 Brucella suis bv. 5 str. 513 3246
Campylobacter (10)
35 Campylobacter concisus 13826 NC_009802, NC_009796(pCCON16), NC_009795(pCCON31) 1985
36 Campylobacter curvus 525.92 NC_009715 1931
37 Campylobacter fetus subsp. fetus 82-40 NC_008599 1719
38 Campylobacter hominis ATCC BAA-381 NC_009714, NC_009713(pCH4) 1687
39 Campylobacter jejuni RM1221 NC_003912 1838
40 Campylobacter jejuni subsp. doylei 269.97 NC_009707 1731
41 Campylobacter jejuni subsp. jejuni 81-176 NC_008787, NC_008770(pVir), NC_008790(pTet) 1758
42 Campylobacter jejuni subsp. jejuni 81116 NC_009839 1626
43 Campylobacter jejuni subsp. jejuni NCTC 11168 NC_002163 1623
44 Campylobacter lari RM2100 NC_012039, NC_012040(pCL2100) 1545
Clostridium (10)
45 Clostridium botulinum A str. ATCC 19397 NC_009697 3548
46 Clostridium botulinum A str. ATCC 3502 NC_009495, NC_009496(pBOT3502) 3590
47 Clostridium botulinum A str. Hall NC_009698 3404
48 Clostridium botulinum A2 str. Kyoto str. Kyoto-F NC_012563 3878
49 Clostridium botulinum A3 str. Loch Maree NC_010520, NC_010418(pCLK) 3984
50 Clostridium botulinum B str. Eklund 17B NC_010674, NC_010680(pCLL) 3527
51 Clostridium botulinum B1 str. Okra okra NC_010516, NC_010379(pCLD) 3852
52 Clostridium botulinum E3 str. Alaska E43 NC_010723 3256
53 Clostridium botulinum F str. Langeland NC_009699, NC_009700(pCLI) 3659
54 Clostridium tetani E88 NC_004557, NC_004565(pE88) 2432
Corynebacterium (14)
55 Corynebacterium aurimucosum ATCC 700975 2551
56 Corynebacterium diphtheriae NCTC 13129 NC_002935 2272
57 Corynebacterium diphtheriae NCTC 13129 2272
58 Corynebacterium efficiens YS-314 2994
59 Corynebacterium glutamicum ATCC 13032 3057
60 Corynebacterium glutamicum ATCC 13032 2993
61 Corynebacterium glutamicum R 3080
62 Corynebacterium jeikeium K411 2120
63 Corynebacterium kroppenstedtii DSM 44385 2018
64 Corynebacterium pseudotuberculosis 1002 2057
65 Corynebacterium pseudotuberculosis C231 2053
66 Corynebacterium pseudotuberculosis FRC41 2110
67 Corynebacterium pseudotuberculosis I19 2066
68 Corynebacterium urealyticum DSM 7109 2022
Coxiella burnetii (5)
69 Coxiella burnetii CbuG_Q212 NC_011527 1871
70 Coxiella burnetii CbuK_Q154 NC_011528, NC_011526(pQpRS_K_Q154) 1947
71 Coxiella burnetii Dugway 5J108-111 NC_009727, NC_009726(pQpDG) 2045
72 Coxiella burnetii RSA 331 NC_010117, NC_010115(QpH1) 1975
73 Coxiella burnetii RSA 493 NC_002971, NC_004704(pQpH1) 1848
Escherichia coli (11)
74 Escherichia coli 536 NC_008253 4620
75 Escherichia coli CFT073 NC_004431 5339
76 Escherichia coli F11 NZ_AAJU00000000 4704
77 Escherichia coli O157:H7 str. EC 4115 5477
78 Escherichia coli O157:H7 str. EDL933 5449
79 Escherichia coli O157:H7 str. Sakai NC_002695, NC_002128 (pO157), NC_002127 (pOSAK1) 5318
80 Escherichia coli O157:H7 str. TW14359 5373
81 Escherichia coli str. K-12 substr. DH10B 4126
82 Escherichia coli str. K-12 substr. MG1655 NC_000913 4133
83 Escherichia coli str. K-12 substr. W3110 4227
84 Escherichia coli UTI89 NC_007946, NC_007941(pUTI89) 5166
Francisella (9)
85 Francisella philomiragia subsp. philomiragia ATCC 25017 NC_010336, NC_010331(pFPHI01) 1915
86 Francisella tularensis subsp. holarctica NC_007880 1754
87 Francisella tularensis subsp. holarctica FTNF002-00 NC_009749 1580
88 Francisella tularensis subsp. holarctica OSU18 NC_008369 1555
89 Francisella tularensis subsp. mediasiatica FSC147 NC_010677 1406
90 Francisella tularensis subsp. novicida U112 NC_008601 1719
91 Francisella tularensis subsp. tularensis FSC198 NC_008245 1605
92 Francisella tularensis subsp. tularensis SCHU S4 NC_006570 1603
93 Francisella tularensis subsp. tularensis WY96-3418 NC_009257 1634
Haemophilus influenzae (4)
94 Haemophilus influenzae 86-028NP NC_007146 1792
95 Haemophilus influenzae PittEE NC_009566 1619
96 Haemophilus influenzae PittGG NC_009567 1667
97 Haemophilus influenzae Rd KW20 NC_000907 1657
Helicobacter pylori (6)
98 Helicobacter pylori 26695 NC_000915 1576
99 Helicobacter pylori G27 NC_011333, NC_011334(pHPG27) 1504
100 Helicobacter pylori HPAG1 NC_008086, NC_008087(pHPAG1) 1544
101 Helicobacter pylori J99 NC_000921 1489
102 Helicobacter pylori P12 NC_011498, NC_011499(HPP12) 1579
103 Helicobacter pylori Shi470 NC_010698 1569
Herpesvirus (52)
104 Alcelaphine herpesvirus 1, complete genome 71
105 Anatid herpesvirus 1, complete genome 77
106 Anguillid herpesvirus 1, complete genome 143
107 Ateline herpesvirus 3, complete genome 73
108 Bovine herpesvirus 1, complete genome 70
109 Bovine herpesvirus 4, complete genome 79
110 Bovine herpesvirus 5, complete genome 70
111 Callitrichine herpesvirus 3, complete genome 72
112 Caviid herpesvirus 2, complete genome 106
113 Cercopithecine herpesvirus 2, complete genome 75
114 Cercopithecine herpesvirus 9, complete genome 74
115 Cyprinid herpesvirus 3, complete genome 160
116 Equid herpesvirus 2, complete genome 79
117 Equid herpesvirus 4, complete genome 79
118 Equid herpesvirus 9, complete genome 80
119 Felid herpesvirus 1, complete genome 77
120 Gallid herpesvirus 1, complete genome 79
121 Gallid herpesvirus 2, complete genome 85
122 Gallid herpesvirus 3, complete genome 76
123 Human herpesvirus 1 77
124 Human herpesvirus 1 strain F, complete genome 77
125 Human herpesvirus 1 strain H129, complete genome 77
126 Human herpesvirus 2 77
127 Human herpesvirus 3 73
128 Human herpesvirus 4 80
129 Human herpesvirus 4 type 1 94
130 Human herpesvirus 5 165
131 Human herpesvirus 6A 88
132 Human herpesvirus 6B 104
133 Human herpesvirus 7 86
134 Human herpesvirus 8 86
135 Ictalurid herpesvirus 1, complete genome 90
136 Macacine herpesvirus 1, complete genome 75
137 Macacine herpesvirus 3, complete genome 223
138 Macacine herpesvirus 4, complete genome 80
139 Macacine herpesvirus 5, genome 89
140 Meleagrid herpesvirus 1, complete genome 79
141 Murid herpesvirus 1, complete genome 161
142 Murid herpesvirus 2, complete genome 167
143 Murid herpesvirus 4, complete genome 74
144 Ostreid herpesvirus 1, complete genome 127
145 Ovine herpesvirus 2, complete genome 73
146 Panine herpesvirus 2, complete genome 165
147 Papiine herpesvirus 2, complete genome 75
148 Psittacid herpesvirus 1, complete genome 77
149 Ranid herpesvirus 1, complete genome 132
150 Ranid herpesvirus 2, complete genome 147
151 Rodent herpesvirus Peru, complete genome 82
152 Saimiriine herpesvirus 1, complete genome 70
153 Saimiriine herpesvirus 2, complete genome 76
154 Suid herpesvirus 1, complete genome 175
155 Tupaiid herpesvirus 1, complete genome 158
Human immunodeficiency virus (2)
156 Human immunodeficiency virus 1 NC_001802 24
157 Human immunodeficiency virus 2 NC_001722 9
Legionella pneumophila (4)
158 Legionella pneumophila str. Corby 3206
159 Legionella pneumophila str. Lens 2934
160 Legionella pneumophila str. Paris 3166
161 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 2942
Listeria monocytogenes (3)
162 Listeria monocytogenes EGD-e 2846
163 Listeria monocytogenes HCC23 2974
164 Listeria monocytogenes str. 4b F2365 2821
Lymphocystis virus (4)
165 Glossina pallidipes salivary gland hypertrophy virus, complete genome 160
166 Lymphocystis disease virus - isolate China, complete genome 239
167 Lymphocystis disease virus 1, complete genome 110
168 Viral hemorrhagic septicemia virus, complete genome 6
Measles virus (1)
169 Measles virus NC_001498 7
Mycobacterium (15)
170 Mycobacterium avium 104 5120
171 Mycobacterium avium subsp. paratuberculosis K-10 4350
172 Mycobacterium bovis AF2122/97 3918
173 Mycobacterium bovis BCG str. Pasteur 1173P2 3949
174 Mycobacterium intracellulare ATCC 13950 5232
175 Mycobacterium kansasii ATCC 12478 5913
176 Mycobacterium leprae Br4923 1604
177 Mycobacterium leprae TN 1605
178 Mycobacterium marinum M 5452
179 Mycobacterium smegmatis str. MC2 155 6717
180 Mycobacterium tuberculosis CDC1551 NC_002755 4189
181 Mycobacterium tuberculosis F11 3941
182 Mycobacterium tuberculosis H37Ra 4034
183 Mycobacterium tuberculosis H37Rv NC_000962 3989
184 Mycobacterium tuberculosis KZN 1435 4059
Mycoplasma bovis (2)
185 Mycoplasma bovis Hubei-1 801
186 Mycoplasma bovis PG45 765
Mycoplasma hyopneumoniae (3)
187 Mycoplasma hyopneumoniae 232 691
188 Mycoplasma hyopneumoniae 7448 657
189 Mycoplasma hyopneumoniae J 657
Mycoplasma mycoides (4)
190 Mycoplasma mycoides subsp. capri str. GM12 830
191 Mycoplasma mycoides subsp. capri str. GM12 832
192 Mycoplasma mycoides subsp. mycoides SC str. Gladysdale 1095
193 Mycoplasma mycoides subsp. mycoides SC str. PG1 1016
Neisseria meningitidis (4)
194 Neisseria meningitidis 053442 NC_010120 2020
195 Neisseria meningitidis FAM18 NC_008767 1917
196 Neisseria meningitidis MC58 NC_003112 2063
197 Neisseria meningitidis Z2491 NC_003116 1909
NERVE (2)
198 NERVE gram negative 38
199 NERVE gram postive 33
Rickettsia (1)
200 Rickettsia prowazekii str. Madrid E 835
Salmonella (23)
201 Salmonella bongori NCTC 12419 3864
202 Salmonella enterica serovar Typhimurium 4446
203 Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 4510
204 Salmonella enterica subsp. enterica serovar Agona str. SL483 4614
205 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 4666
206 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 4617
207 Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 4206
208 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 3965
209 Salmonella enterica subsp. enterica serovar Gallinarum str. RKS5078 4325
210 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 4779
211 Salmonella enterica subsp. enterica serovar Newport str. SL254 4805
212 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 4080
213 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 4093
214 Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 4640
215 Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 4627
216 Salmonella enterica subsp. enterica serovar Typhi str. CT18 4766
217 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 4323
218 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 5413
219 Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74 4842
220 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 4554
221 Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 4447
222 Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 4871
223 Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 4555
Shigella (5)
224 Shigella boydii CDC 3083-94 BS512 4557
225 Shigella boydii Sb227 4282
226 Shigella dysenteriae Sd197 4502
227 Shigella flexneri 2a str. 2457T 4061
228 Shigella flexneri 5 str. 8401 4115
Streptococcus pneumoniae (1)
229 Streptococcus pneumoniae 70585 2202
Vaccinia virus (1)
230 Vaccinia virus NC_006998 223
Variola virus (1)
231 Variola virus NC_001611 197
Vibrio (22)
232 Vibrio anguillarum 775 chromosome chromosome I, complete sequence 2812
233 Vibrio cholerae Ban5 100
234 Vibrio cholerae Ind4 89
235 Vibrio cholerae Ind5 96
236 Vibrio cholerae LMA3894-4 3153
237 Vibrio cholerae M66-2 3693
238 Vibrio cholerae Mex1 78
239 Vibrio cholerae MJ-1236 chromosome 1, complete genome 2768
240 Vibrio cholerae O1 biovar eltor str. N16961 3835
241 Vibrio cholerae O395 3934
242 Vibrio cholerae O395 chromosome 1, complete sequence 1133
243 Vibrio fischeri ES114 chromosome I, complete genome 2586
244 Vibrio fischeri MJ11 chromosome II, complete sequence 1254
245 Vibrio fluvialis Ind1 111
246 Vibrio furnissii NCTC 11218 4462
247 Vibrio harveyi ATCC BAA-1116 chromosome I, complete genome 3548
248 Vibrio parahaemolyticus RIMD 2210633 chromosome chromosome 1, complete sequence 3080
249 Vibrio sp. Ex25 chromosome chromosome 1, complete sequence 2915
250 Vibrio splendidus LGP32 chromosome 2, complete genome 1485
251 Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence 2896
252 Vibrio vulnificus MO6-24/O chromosome chromosome I, complete sequence 2980
253 Vibrio vulnificus YJ016 chromosome I, complete sequence 3259
Yellow fever virus (1)
254 Yellow fever virus NC_002031 14
Total 254 580900