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Vaxitop

Vaxitop (Vaccine Epitope) is a vaccine epitope prediction and analysis system based on the principle of reverse vaccinology.

 

Vaxitop Query:

     

Select a Genome(s), Query a Protein (Optional), and Set up Parameters (Optional)
Protein Sequence(s) (FASTA format, NCBI proten GI or RefSeq Accession Number) (Examples: Gram- B. abortus SodC, Gram+ Bacillus anthracis PA, 62317454, or YP_016495.2) (Note: Up to 50 sequences)
Sequence Format Protein Sequence (Fasta Format) Protein GI Protein RefSeq Accession Gene ID Gene Locus Tag Protein Sequence (Fasta file links)
File Upload
MHC Host Species	any species human mouse chimpanzee macaque
MHC Allele	any allele
Epitope Length	any length
Note
help

     

Please cite the following Vaxign references:

1. Xiang Z, He Y. 2009. Vaxign: a web-based vaccine target design program for reverse vaccinology. Procedia in Vaccinology. Volume 1, Issue 1, Pages 23-29.
2. He Y, Xiang Z, Mobley HLT. Vaxign: the first web-based vaccine design program for reverse vaccinology and an application for vaccine development.J Biomed Biotechnol. 2010;2010:297505. Epub 2010 Jul [PMID:20671958] [Journal Link]     

Please see the Vaxign Documentation for more information. Please contact us if you would like to have your favorite genome(s) included in our precomputed Vaxign database. Your suggestions and comments are welcome. Thank you.