env |
| General Information |
| Protegen ID |
1251 |
|
Sequence Strain (Species/Organism) |
Human immunodeficiency virus 1 |
|
Taxonomy ID |
11676
|
|
Other Database IDs |
CDD:278917 CDD:295533 CDD:197369 |
|
Molecule Role |
Protective antigen |
| References |
|
| Gene Information |
|
Gene Name |
env |
| Protein Information |
|
Protein Name |
envelope glycoprotein |
|
NCBI Protein GI |
169641099
|
|
Protein pI |
8.37 |
|
Protein Weight |
86073.29 |
|
Protein Length |
888 |
|
Protein Note |
subtype: C |
|
Protein Sequence |
>ACA61283.1 envelope glycoprotein, partial [Human immunodeficiency virus 1]
VPVWKEAKTTLFCASDAKAYETEVHNVWATHACVPTDPNPQEMLMGNVTKNFNMWKNDMVEQMHEDVISL
WDQSLKPCVKLTPLCVTLECREVNSTNRNVTVDAKEEIKNCSFNATTEIRDKQKKVHALFYKLDIVPLDN
KTSSNHTNYRLINCNTSAITQACPKINFDPIPIHYCAPAGFAILKCNNDTFNGTGPCTNVSTVQCTHGIK
PVVSTQLLLNGSLAEKEIIIRSANLTDNAKTIIVHLNQSVEIVCTRPNNNTRDSIRIGPGQTFYATGDII
GDIRQAHCNISEAAWNKTLYEVSKKLEEHYNKTIKFNASSGGDLEITTHSFNCRGEFFYCNTSKLFNGTY
MNMNGTNSSSDSIITIPCRIKQFINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGPGNGTNNTETF
RPGGGDMRDNWRSELYKYKVVEIKPLGVAPTEAKRRVVERQKRAVGLGAMFLGFLGAAGSTMGAASMTLT
VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAIERYLREQQLLGLWGCSEKLICPTTV
PWNDSWSNKSLDIIWGNMTWMEWDKEISNYTQTIFNLLEDSQIQQEKNEKDLLELDSWKNLWNWFNISNW
LWYIKIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTLTPHPREPDRLRGIEEEGGEQDKGRSIRL
VNGFLALAWDDLRSLCLFLYHRLRDFISVTARAVDILGRRGWEALKYLKSIVQYWLLELKKSAISLLDTI
AIAVAEGTDRIIELIQRVFRAIINRPTRI
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
Starting position |
Ending position |
| 933394 |
IRIGPGQT |
265 |
273 |
|
|
|
VPVWKEAKTTLFCASDAKAYETEVHNVWATHACVPTDPNPQEMLMGNVTKNFNMWKNDMVEQMHEDVISLWDQSLKPCVKLTPLCVTLECREVNSTNRNVTVDAKEEIKNCSFNATTEIRDKQKKVHALFYKLDIVPLDNKTSSNHTNYRLINCNTSAITQACPKINFDPIPIHYCAPAGFAILKCNNDTFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSANLTDNAKTIIVHLNQSVEIVCTRPNNNTRDSIRIGPGQTFYATGDIIGDIRQAHCNISEAAWNKTLYEVSKKLEEHYNKTIKFNASSGGDLEITTHSFNCRGEFFYCNTSKLFNGTYMNMNGTNSSSDSIITIPCRIKQFINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGPGNGTNNTETFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTEAKRRVVERQKRAVGLGAMFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAIERYLREQQLLGLWGCSEKLICPTTVPWNDSWSNKSLDIIWGNMTWMEWDKEISNYTQTIFNLLEDSQIQQEKNEKDLLELDSWKNLWNWFNISNWLWYIKIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTLTPHPREPDRLRGIEEEGGEQDKGRSIRLVNGFLALAWDDLRSLCLFLYHRLRDFISVTARAVDILGRRGWEALKYLKSIVQYWLLELKKSAISLLDTIAIAVAEGTDRIIELIQRVFRAIINRPTRI
|