env |
| General Information |
| Protegen ID |
1266 |
|
Sequence Strain (Species/Organism) |
Human immunodeficiency virus 1 |
|
Taxonomy ID |
11676
|
|
Other Database IDs |
CDD:278917 CDD:295533 CDD:197369 |
|
Molecule Role |
Protective antigen |
| References |
|
| Gene Information |
|
Gene Name |
env |
| Protein Information |
|
Protein Name |
envelope glycoprotein |
|
NCBI Protein GI |
58043865
|
|
Protein pI |
7.78 |
|
Protein Weight |
91300.9 |
|
Protein Length |
933 |
|
Protein Note |
clone can be used to generate pseudotyed infectious virions that use the CCR5 coreceptor; subtype: B |
|
Protein Sequence |
>AAW64267.1 envelope glycoprotein [Human immunodeficiency virus 1]
MRVKEIRKNYRHLWKWGIMLLGMLMICSATENLWVTVYYGVPVWKEATTTLFCASDAKGYEKEVHNVWAT
HACVPTDPNPQEVVLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCSDVNTTSVNT
TASSMEGGEIKNCSFNTTTSMSDKMQKEYALFYTLDVVPIVKENNTYRLISCNTSVITQACPKVSFEPIP
IHYCAPAGFAILMCNNKTFDGKGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSDNFTDNAKTI
IVHLNESIEITCTRPNNNTSKSITIGPGRAFYATGRIIGDIRKAHCNISGEKWHNALEQIVKKLGEKFEN
ATTIRFNQSSGGDQEIVMHTFNCGGEFFYCNSTQLFNSTWWPNGTTTEWSNETSNGTITLPCRIKQIINM
WQEVGKAMYAPPISGPISCSSNITGLLLVRDGGNDNETNGTETFRPGGGDMRDNWRSELYKYKVVKIEPL
GVAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQH
LLQLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSLKWIWDNMTWMEWEKE
IDNYTGIIYNLLEESQNQQDKNEKELLELDKWASLWTWFDITNWLWYIKIFIMIVGGLVGLRIVFAVLSI
VNRVRQGYSPLSFQTRLPAPRGLDRPEGTEEEGGDRDKDRSIRLVDGFLALIWDDLRSLCLFSYHRLRDL
LLIVARVVEILGHRGWEILKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRIIEVLQRIGRAILHIP
TRIRQGLERALL
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
Starting position |
Ending position |
| 94978 |
YLKDQQLLGIWGCSGKL |
582 |
599 |
| 158950 |
LELDKWAS |
657 |
665 |
| 150371 |
LLELDKWASLW |
656 |
667 |
| 149298 |
ELDKWAS |
658 |
665 |
| 146417 |
LELDKWASL |
657 |
666 |
| 150865 |
KSITIGPGRA |
301 |
311 |
| 162870 |
LLELDKWA |
656 |
664 |
| 174184 |
LLELDKWASLW |
656 |
667 |
| 7214 |
CTTAVPWN |
600 |
608 |
| 18911 |
GCSGKLICT |
593 |
602 |
| 433200 |
WGCSGKLICTT |
592 |
603 |
| 541782 |
ELDKWASLW |
658 |
667 |
| 12988 |
ELDKWA |
658 |
664 |
| 566698 |
IWGCSGKLICTTAVP |
591 |
606 |
|
|
|
MRVKEIRKNYRHLWKWGIMLLGMLMICSATENLWVTVYYGVPVWKEATTTLFCASDAKGYEKEVHNVWATHACVPTDPNPQEVVLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCSDVNTTSVNTTASSMEGGEIKNCSFNTTTSMSDKMQKEYALFYTLDVVPIVKENNTYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILMCNNKTFDGKGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSDNFTDNAKTIIVHLNESIEITCTRPNNNTSKSITIGPGRAFYATGRIIGDIRKAHCNISGEKWHNALEQIVKKLGEKFENATTIRFNQSSGGDQEIVMHTFNCGGEFFYCNSTQLFNSTWWPNGTTTEWSNETSNGTITLPCRIKQIINMWQEVGKAMYAPPISGPISCSSNITGLLLVRDGGNDNETNGTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSLKWIWDNMTWMEWEKEIDNYTGIIYNLLEESQNQQDKNEKELLELDKWASLWTWFDITNWLWYIKIFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTRLPAPRGLDRPEGTEEEGGDRDKDRSIRLVDGFLALIWDDLRSLCLFSYHRLRDLLLIVARVVEILGHRGWEILKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRIIEVLQRIGRAILHIPTRIRQGLERALL
|