VIOLIN Logo
VO Banner
Search: for Help
Protegen Home
Introduction
Statistics
News and Updates
Protegen Query
Protegen BLAST
Selected Bacteria
Brucella spp. (26)
B. anthracis (14)
E. coli (40)
M. tuberculosis (28)
N. meningitidis (18)
Selected Viruses
Ebola virus (19)
HIV (41)
Influenza virus (50)
Selected Parasites
Plasmodium (47)
Data Submission
Data Exchange
Data Download
Documentation
FAQs
Disclaimer
Contact Us
UMMS Logo


Ccl21a

General Information
Protegen ID 1390
Sequence Strain (Species/Organism) Mus musculus
Taxonomy ID 10090
Molecule Role Protective antigen
References  
Gene Information
Gene Name Ccl21a
NCBI Gene ID 18829
Genbank Accession AF035684
Chromosome No 4
Locus Tag RP23-411B7.4
Gene Starting Position 42772859
Gene Ending Position 42773990
DNA Sequence 
>NC_000070.6:42772859-42773990 Mus musculus strain C57BL/6J chromosome 4, GRCm38.p4 C57BL/6J
CTGAGGCTGGATCACCTTTTTATTCAGTTAGGTATAAATCATAGGTGCAAGGACAAGGGAAGGGCGCCAT
GGAGAGCAGGTTCAGGTCTTGGGACCTGAGTGACCTCCTAGAGGGGACAGTCCTGCTGTCTCCTTCCTCA
TTCCCTGGGAGACACTCTTTCTTCTGACTCTCTAGGTCTACCCCAGGGAAGGCAGCTCCGCCAGGTAAGA
AAGGGATGGCCGTGCAGATGTGATGGTTGAAGCAGGGCAAGGGTGTGGACGGAGGCCAGCATGAGGTGGC
TGCTTTGGGCTCCTGAGTCTGTTTTCTAGCTCCCTCTTTGCCTGTGAGTTGGACCGTGAACCACCCAGCT
TGAAGTTCGTGGGGGATCTCCTGGGCTCCAGGCGGGCTACTGGGCTATCCTCTTGAGGGCTGTGTCTGTT
CAGTTCTGGCAGGGCAGAAAAGAAGTGTGAGAGGCAGGTGGAGGGAGGCTCCTCTTTGTTCCCCTTCCAT
CCCTTCAGCAGCCTCACCTCTTGCAGCCCTTGGAGCCCTTTCCTTTCTTTCCAGACTTAGAGGTTCCCCG
GTTCTTCCTGCAGCCGGGGCTTTGTTTCCCTGGGGCTGGAGGCTGGTCCAGGCGGCGCATCAGGTTCTGC
ACCCAGCCTTCCTCAGGGTTTGCACATAGCTCAGGCTTAGAGTGCTTCCGGGGTGAGAACCTGAGGGTTG
GAGGGCAGCAAGCTTTCTTAGTCTGGCCCATCACACCTCCCCAACCCAACCACCAGCCTGTACCCACCCG
ATCAGCGCACTCACAGGATTGCCGGGATGGGACAGCCTAAACTTGGTTCTTGCTTCCTATAGCCTCGGAC
AATACTGTAGGGAATTTTCTTCTGGCTGTACTTAAGGCAGCAGTCCTGACCCCCTCCATCACTGCCTGCA
AGGTAGGTGCACAGACCCAGCTGCGGCTTATAAGGTGTCTCTATGGCCCCCTTCCCCAGCCAAAGCCTCT
CCCTCCTTGGTACCTTGGGTCCAGGGGATGCAGAGAGCCAGGACCAGGCTAAGGAGGCTCAGAGTCATCA
TCTGAGCCATGATTGTGGTTGAGTTGAGGATGAGACCAGAGCTGTAGGTGAGATGGACAGCCGCAAGTTG
GGGTCTGTGTGT
Protein Information
Protein Name chemokine (C-C motif) ligand 21A (serine)
NCBI Protein GI 14547891
Protein Accession NP_035254
Protein pI 10.52
Protein Weight 14259.52
Protein Length 133
Protein Note Also known as ALP; SLC; plt; CKb9; Tca4; 6Ckine; Scya21; 6CKBAC2; SCYA21a; Scya21b; AW987545
Protein Sequence 
>NP_035254.1 C-C motif chemokine 21a precursor [Mus musculus]
MAQMMTLSLLSLVLALCIPWTQGSDGGGQDCCLKYSQKKIPYSIVRGYRKQEPSLGCPIPAILFSPRKHS
KPELCANPEEGWVQNLMRRLDQPPAPGKQSPGCRKNRGTSKSGKKGKGSKGCKRTEQTQPSRG
Epitope Information
IEDB Linear Epitope