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L1R

General Information
Protegen ID 1403
Sequence Strain (Species/Organism) Vaccinia virus
Taxonomy ID 10245
Molecule Role Protective antigen
Related Vaccines(s) Vaccinia virus DNA vaccine pWRG/L1R
References  
Gene Information
Gene Name L1R
NCBI Gene ID 3707544
Genbank Accession AF226617
Locus Tag VACWR088
Gene Starting Position 77024
Gene Ending Position 77776
DNA Sequence 
>NC_006998.1:77024-77776 Vaccinia virus, complete genome
AATGGGTGCCGCGGCAAGCATACAGACGACGGTGAATACACTCAGCGAACGTATCTCGTCTAAATTAGAA
CAAGAAGCGAATGCTAGTGCTCAAACAAAATGTGATATAGAAATCGGAAATTTTTATATCCGACAAAACC
ATGGATGTAACCTCACTGTTAAAAATATGTGCTCTGCGGACGCGGATGCTCAGTTGGATGCTGTGTTATC
AGCCGCTACAGAAACATATAGTGGATTAACACCGGAACAAAAAGCATACGTGCCAGCTATGTTTACTGCT
GCGTTAAACATTCAGACGAGTGTAAACACTGTTGTTAGAGATTTTGAAAATTATGTGAAACAGACTTGTA
ATTCTAGCGCGGTCGTCGATAACAAATTAAAGATACAAAACGTAATCATAGATGAATGTTACGGAGCCCC
AGGATCTCCAACAAATTTGGAATTTATTAATACAGGATCTAGCAAAGGAAATTGTGCCATTAAGGCGTTG
ATGCAATTGACGACTAAGGCCACTACTCAAATAGCACCTAAACAAGTTGCTGGTACAGGAGTTCAGTTTT
ATATGATTGTTATCGGTGTTATAATATTGGCAGCGTTGTTTATGTACTATGCCAAGCGTATGTTGTTCAC
ATCCACCAATGATAAAATCAAACTTATTTTAGCCAATAAGGAAAACGTCCATTGGACTACTTACATGGAC
ACATTCTTTAGAACTTCTCCGATGGTTATTGCTACCACGGATATGCAAAACTG
Protein Information
Protein Name IMV membrane protein
NCBI Protein GI 66275885
Protein Accession YP_232970
Protein pI 7.2
Protein Weight 25591.99
Protein Length 250
Protein Note similar to VACCP-L1R; target of neutralizing antibody; S-S bond formation pathway thiol substrate; myristylprotein
Protein Sequence 
>YP_232970.1 IMV membrane protein [Vaccinia virus]
MGAAASIQTTVNTLSERISSKLEQEANASAQTKCDIEIGNFYIRQNHGCNLTVKNMCSADADAQLDAVLS
AATETYSGLTPEQKAYVPAMFTAALNIQTSVNTVVRDFENYVKQTCNSSAVVDNKLKIQNVIIDECYGAP
GSPTNLEFINTGSSKGNCAIKALMQLTTKATTQIAPKQVAGTGVQFYMIVIGVIILAALFMYYAKRMLFT
STNDKIKLILANKENVHWTTYMDTFFRTSPMVIATTDMQN
Epitope Information
IEDB Linear Epitope