VIOLIN: Vaccine Investigation and Online Information Network

ubiquitin

General Information

Protegen ID

1621

Sequence Strain (Species/Organism)

Sus scrofa

Taxonomy ID

9823

Other Database IDs

CDD:294102
CDD:176398
CDD:214563

Molecule Role

Protective antigen

Related Vaccines(s)

PRRSV DNA vaccine pCA-U-optiGP5

References

Gene Information

Gene Name

ubiquitin

NCBI Nucleotide GI

164707

DNA Sequence

>gi|164707|gb|M18159.1|PIGUBP Pig poly-ubiquitin mRNA, 3' end
GAAGATGGGCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCA
GAGGTGGGATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAAGTGGAGCCCAGCGA
CACCATCGAGAATGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCCCCAGACCAGCAGAGGCTGATC
TTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCCACCCTGC
ACCTGGTCCTCCGCCTCAGAGGTGGGATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCT
GGAAGTGGAGCCCAGCGACACCATCGAGAATGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCCCCCA
GACCAGCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACATCC
AGAAGGAGTCCACCCTGCACCTGGTCCTCCGCCTCAGAGGTGGGATGCAGATCTTCGTGAAGACCTTGAC
TGGTAAGACCATCACCCTGGAAGTGGAGCCCAGCGACACCATCGAGAACGTCAAGGCGAAGATCCAGGAC
AAGGAAGGCATCCCCCCAGACCAGCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCC
TGTCTGACTACAACATCCAGAAGGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGGTTTCTAAGT
TCTCCCTTTTAAGCTTTCAACAAATTTCATTGCACTTTTCTTTCAATAAAGTTGTTGCATTC

Protein Information

Protein Name

ubiquitin copy 1

NCBI Protein GI

164708

Protein Accession

AAA31133.1

Protein pI

7.82

Protein Weight

27768.96

Protein Length

319

Protein Note

Ubiquitin-like proteins; cl00155

Protein Sequence

>AAA31133.1 poly-ubiquitin precursor, partial [Sus scrofa]
EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP
DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGF

Epitope Information

IEDB Linear Epitope