gapA |
| General Information |
| Protegen ID |
1628 |
|
Sequence Strain (Species/Organism) |
Haemophilus parasuis SH0165 |
|
Taxonomy ID |
557723
|
|
Molecule Role |
Protective antigen |
| Related Vaccines(s) |
Haemophilus Parasuis Avirulent Live Culture Vaccine (USDA: 19J1.00)
,
pCgap DNA vaccine encoding glyceraldehyde-3-phosphate dehydrogenase
|
| References |
|
| Gene Information |
|
Gene Name |
gapA |
|
NCBI Gene ID |
7278596
|
|
Genbank Accession |
CP001321 |
|
Locus Tag |
HAPS_RS00005 |
|
Gene Starting Position |
1 |
|
Gene Ending Position |
1020 |
|
DNA Sequence |
>NC_011852.1:1-1020 Haemophilus parasuis SH0165, complete genome
TATGGCAATTAAAATTGGTATTAACGGCTTTGGCCGTATCGGTCGTATCGTATTCCGTGCAGCACAAAAA
CGTGATGACATCGAAGTAGTTGGTATCAACGACTTAATTGATGTTGAGTATATGGCATATATGCTCAAAT
ACGATTCAACTCACGGTCGTTTCGATGGCACTGTCGAAGTAAAAGACGGCAAATTAGTTGTAAACGGTAA
AGAAATCCGTGTTACTTCTGAGCGTGACCCAGCTAACTTAAAATGGAATGAAATTGGTGTGGATATCGCA
GTTGAAGCAACAGGTTTATTCTTGGACGATACAACTGCTCGTAAACACATCGAAGCTGGTGCGAAAAAAG
TCGTTTTAACTGGTCCATCTAAAGATAGCACACCTATGTTCGTAAACGGTGTAAACTTCAACGCTTATGC
TGGTCAAGACATCGTTTCTAACGCTTCTTGTACAACAAACTGCTTAGCACCACTTGCTCGTGTTATCCAC
GAAACATTTGGTATCAAAGAAGGTTTAATGACAACTGTTCATGCAACAACAGCAACACAAAAAACTGTTG
ATGGTCCATCAGCAAAAGACTGGCGCGGTGGTCGTGGTGCGGCACAAAACATCATTCCATCTTCAACAGG
TGCAGCGAAAGCAGTAGGTAAAGTATTACCAGCATTAAACGGTAAATTAACAGGTATGGCGTTCCGTGTT
CCAACAGCAAACGTATCTGTTGTTGATTTAACTGTAAACTTAGAAAAACCAGCAAGCTACGAAGAGATCA
AAAAAGCGATCAAAGATGCAGCAGAAGGTAAAACATTCAACGGCGAATTAAAAGGCGTTTTAGGTTATAC
TGAAGATGCAGTAGTATCAACAGACTTCAACGGTGCAGTTGAAACTTCTGTATTTGATGCAGATGCAGGT
ATCGCATTAACAGATACATTCGTGAAACTTGTTTCTTGGTATGACAACGAAACTGGTTACTCAAACAAAG
TATTAGACTTAGTTGCTCACGTTTACAACTACAAAGGCTA
|
| Protein Information |
|
Protein Name |
type I glyceraldehyde-3-phosphate dehydrogenase |
|
NCBI Protein GI |
498484148
|
|
Protein Accession |
WP_010785946 |
|
Protein pI |
6.07 |
|
Protein Weight |
32717.08 |
|
Protein Length |
339 |
|
Protein Note |
COG:G;COG0057 |
|
Protein Sequence |
>WP_010785946.1 type I glyceraldehyde-3-phosphate dehydrogenase [Glaesserella parasuis]
MAIKIGINGFGRIGRIVFRAAQKRDDIEVVGINDLIDVEYMAYMLKYDSTHGRFDGTVEVKDGKLVVNGK
EIRVTSERDPANLKWNEIGVDIAVEATGLFLDDTTARKHIEAGAKKVVLTGPSKDSTPMFVNGVNFNAYA
GQDIVSNASCTTNCLAPLARVIHETFGIKEGLMTTVHATTATQKTVDGPSAKDWRGGRGAAQNIIPSSTG
AAKAVGKVLPALNGKLTGMAFRVPTANVSVVDLTVNLEKPASYEEIKKAIKDAAEGKTFNGELKGVLGYT
EDAVVSTDFNGAVETSVFDADAGIALTDTFVKLVSWYDNETGYSNKVLDLVAHVYNYKG
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
MHC restriction |
Starting position |
Ending position |
| IEDB ID |
Epitope |
Starting position |
Ending position |
| 549004 |
SNASC |
146 |
151 |
| 856790 |
TTVHATTATQKT |
174 |
186 |
|
|
|
MAIKIGINGFGRIGRIVFRAAQKRDDIEVVGINDLIDVEYMAYMLKYDSTHGRFDGTVEVKDGKLVVNGKEIRVTSERDPANLKWNEIGVDIAVEATGLFLDDTTARKHIEAGAKKVVLTGPSKDSTPMFVNGVNFNAYAGQDIVSNASCTTNCLAPLARVIHETFGIKEGLMTTVHATTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTANVSVVDLTVNLEKPASYEEIKKAIKDAAEGKTFNGELKGVLGYTEDAVVSTDFNGAVETSVFDADAGIALTDTFVKLVSWYDNETGYSNKVLDLVAHVYNYKG
|