S1 |
| General Information |
| Protegen ID |
1643 |
|
Sequence Strain (Species/Organism) |
Bordetella pertussis Tohama |
|
Taxonomy ID |
520
|
|
Other Database IDs |
CDD:111768
GOA:Q599G4
HSSP: P04977
InterPro: IPR003898
UniProtKB/TrEMBL: Q599G4 |
|
Molecule Role |
Protective antigen |
| Related Vaccines(s) |
B. pertussis DNA vaccine pcDNA/S1
|
| References |
|
| Gene Information |
|
Gene Name |
S1 |
| Protein Information |
|
Protein Name |
toxin subunit S1 |
|
NCBI Protein GI |
3152313
|
|
Protein pI |
7.49 |
|
Protein Weight |
28321.94 |
|
Protein Length |
326 |
|
Protein Note |
Pertussis toxin, subunit 1; pfam02917 |
|
Protein Sequence |
>CAA06899.1 toxin subunit S1 [Bordetella pertussis]
MRCTRAIRQTARTGWLTWLAILAVTAPVTSPAWADDPPATVYRYDSRPPEDVFQNGFTAWGNNDNVLDHL
TGRSCQVGSSNSAFVSTSSSRRYTEVYLEHRMQEAVEAERAGRGTGHFIGYIYEVRADNNFYGAASSYFE
YVDTYGDNAGRILAGALATYQSEYLAHRRIPPENIRRVTRVYHNGITGETTTTEYSNARYVSQQTRANPN
PYTSRRSVASIVGTLVRMAPVIGACMARQAESSEAMAAWSERAGEAMVLVYYESIAYSF
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
Starting position |
Ending position |
| 75686 |
YRYDSRPP |
42 |
50 |
| 72153 |
VYRYDSRP |
41 |
49 |
| 7851 |
DDPPATVYRYDSRPPEDV |
35 |
53 |
| 55389 |
RQAESSEAMAAWSERAGEA |
238 |
257 |
| 24697 |
HRMQEAVEAERAGRGTGH |
100 |
118 |
| 95008 |
EDVFQNGFTAW |
50 |
61 |
| 78115 |
DDPPATVYRYDSRPP |
35 |
50 |
| 21477 |
GNNDNVLDHLTGRSC |
61 |
76 |
| 72154 |
VYRYDSRPPEDV |
41 |
53 |
| 61920 |
STSSSRRYTEVY |
86 |
98 |
| 7849 |
DDPPATVYRYD |
35 |
46 |
| 15775 |
FEYVDTYGDNAG |
139 |
151 |
| 73983 |
YGDNAGRILAGALAT |
145 |
160 |
| 48751 |
PPATVYRYDSRPPE |
37 |
51 |
| 3381 |
ANPNPYTSRRSV |
207 |
219 |
| 22516 |
GSSNSAFVSTSSSRR |
78 |
93 |
| 3053 |
AMAAWSERAGEA |
245 |
257 |
| 10594 |
DVFQNGFTAWGNND |
51 |
65 |
| 34809 |
LAHRRIPPENIR |
165 |
177 |
| 35509 |
LEHRMQEAVEAERAGRGTGHFI |
98 |
120 |
| 57692 |
SEYLAHRRIPPENIRRVTRV |
162 |
182 |
| 1416 |
AFVSTSSSRRYTEVY |
83 |
98 |
| 7850 |
DDPPATVYRYDSRPPED |
35 |
52 |
| 20455 |
GITGETTTTEYSNARYV |
185 |
202 |
| 78113 |
CQVGSSNSAFVSTSSSRRYTEVYL |
75 |
99 |
| 78107 |
ATYQSEYLAHRRIPP |
158 |
173 |
| 78112 |
CMARQAESSEAMAAWSERAGEAMVLVYYESIAYSF |
235 |
270 |
| 78318 |
YDSRPPEDV |
44 |
53 |
| 78205 |
MAAWSERAGEAMVLVYYESIAYSF |
246 |
270 |
| 78213 |
MVLVYYESIAYSF |
257 |
270 |
| 125327 |
YRYDSRPPEDV |
42 |
53 |
| 125330 |
YVDTYGDNAG |
141 |
151 |
| 125022 |
EAERAGRGTG |
107 |
117 |
| 56519 |
RYDSRPPEDVF |
43 |
54 |
| 53173 |
RANPNPYTSRRSV |
206 |
219 |
| 56461 |
RVYHNGITGET |
180 |
191 |
| 11208 |
EAVEAERAGRGTG |
104 |
117 |
| 22756 |
GTLVRMAPVIG |
223 |
234 |
| 66442 |
TSSSRRYTEVYL |
87 |
99 |
| 54180 |
RILAGALATYQ |
151 |
162 |
| 54216 |
RIPPENIRRVT |
169 |
180 |
| 9571 |
DNVLDHLTGRSC |
64 |
76 |
| 18527 |
GAASSYFEYVDTYG |
133 |
147 |
| 78223 |
PATVYRYDSRPPEDV |
38 |
53 |
| 52162 |
QQTRANPNPYTSRRSVAS |
203 |
221 |
| 78159 |
GALATYQSEYLAHRRIPP |
155 |
173 |
| 63586 |
TEVYLEHRMQEAVE |
94 |
108 |
| 75548 |
YQSEYLAHRR |
160 |
170 |
|
|
|
MRCTRAIRQTARTGWLTWLAILAVTAPVTSPAWADDPPATVYRYDSRPPEDVFQNGFTAWGNNDNVLDHLTGRSCQVGSSNSAFVSTSSSRRYTEVYLEHRMQEAVEAERAGRGTGHFIGYIYEVRADNNFYGAASSYFEYVDTYGDNAGRILAGALATYQSEYLAHRRIPPENIRRVTRVYHNGITGETTTTEYSNARYVSQQTRANPNPYTSRRSVASIVGTLVRMAPVIGACMARQAESSEAMAAWSERAGEAMVLVYYESIAYSF
|
