VIOLIN Logo
VO Banner
Search: for Help
Protegen Home
Introduction
Statistics
News and Updates
Protegen Query
Protegen BLAST
Selected Bacteria
Brucella spp. (26)
B. anthracis (14)
E. coli (40)
M. tuberculosis (26)
N. meningitidis (18)
Selected Viruses
Ebola virus (19)
HIV (41)
Influenza virus (50)
Selected Parasites
Plasmodium (47)
Data Submission
Data Exchange
Data Download
Documentation
FAQs
Disclaimer
Contact Us
UMMS Logo


UL27

General Information
Protegen ID 1653
Sequence Strain (Species/Organism) Gallid alphaherpesvirus 1
Taxonomy ID 10386
Molecule Role Protective antigen
References  
Gene Information
Gene Name UL27
NCBI Gene ID 3239023
Locus Tag GaHV1_gp21
Gene Starting Position 39070
Gene Ending Position 41746
DNA Sequence 
>NC_006623.1:39070-41746 Gallid herpesvirus 1, complete genome
TTTTATTAAATAAACTGCATTTAAACTTATTCGTCTTCGCTTTCTTCTGCCCACGAAGGGTATTCGAGCA
GGGGGTAGTCATCTTCCTTGGTTCGGGGTTTTCTGCGAAATAGGTTTCTCATATTTTTAGCAAAAGCAGA
AAACCGCGCTTTCTGTCTTCGAGCTTTCTGTTCATCCTTGTGTAGAAGCTCAAGGCCTTTCAGAACTCTG
GTGGCAAGTATCCTGTCGTCCTCATCACTATCCTCCTCAACCTCCTCCTCATCCTTGTAGTAACGTCTAG
AGGGTCGTGGAGGAGTTCCGGCCGGGGGAACTGCGCCTGGGAACAGAACCTGAACTGGGTTTGATTTCAG
GTTCATTACATATTTGAACGCCAGCAGTCCTAAAATAATGCTCACCACCACCGCTATCCCAATTCCGAGT
GCGGCGAACGGGTTAGAAAGAAATGAGGCGATGCCAGATACTGTAGAAATTACTGCTGCCGCGGCTGTCA
TCACTACAGTTCCCAATGCCTTTCCTACTTCTCCAAGAGTGTTGCCAAAAAAATCTGCTATTGCTCTAAA
GATTGCATCTCCCCTATCTCCACGTATTACAGTGTCAATGTCTCTGAACCTTTTGTTATAAATATTTTGA
TATCTGACCACATCATCATAGTTTAAAGTCCCAGTATCTCTGAGTTCCTCGCGAGTGTATACTTCGACGG
GCACAAAGTCCAAATCTTCTAGTATAGTGGCGTTCAAGTTGATGAATATGCTCACTTCTTCGATCTCGGA
AGCATTTACTTGTCTAACAAATGTATAGTCTTCGTAAAGAAGGTAGTTTTCTCCCAACAGAAAGTACCGT
CTGTGATTGATCATGCATGGTTCTATCAAATTCCGCCCTTGTAAAATTTCATTATGTTCTCCGAGTTGGC
CTAATATGTCAAGATTGTGGTTTTCTGTTGAGTTCGCAGAAAACTGTGACTCAGGGGAGGACGAATACCT
GAAAATAAGTACTGGTCTGGTATAGCACATGGTTGGGTCCCCTGGCATGCGCATGGAATCCTGCATCCTA
ATATTTTCGATTGGAATTTCTATACATTTTGATACCGCTACGATGTCTCCCAATAGCCTGGCGCTTACAG
GTTGTCCGAACAAAGATGTCATCAGTGAGTTCGGGTTTAGTTTCTTCATCTCATGCCATACAATCAGTTG
GCGGTTCTGAAGCTCACACCACGCTTCCAACAAATTTCCGATAAGCTCGTTAACATGGGCTTGGATTTTG
TCGTATGCAAATTGTAACATGGCAAATGTTGCAGAACTGTGGGTAGTAATTCTATCACCCTGAGGTCCAG
ACTGCAGCGACGCCGTGCGGCGACCTGCGGCTTGGCGACGCTCTCTCCCTCTCGGGAGATGATTTTGTCT
TTGTGCCTCTTCTAGGTACATTTCAGCCAAGCCATGGCTCATGAGTTTCTGAAATGCGATCAGAAATCCG
CCACTACCGAGATAGTATTCGATGTCCCCAGAACGGACATGAGTCGAACTATACTTTCTGGCAAAGATGC
CATCTATGGCCTCCGTGGCTATGGTAGGAACGCATTCAGCCAAATGAAGCCTGCTGATGTTAAAAGGTTG
TTTTCCGGACGAGAACGTCATAGTCATATCTTTAAGTGAAAAGTGGTAACTGTTTTTGTACGAAACACGA
ACTGCTTCCGGGACTTCAATCCATTTACTGAGAGTACATACAGATTCCTTTTCTTCCATTGCATCCCAGC
CTATAGTGAATTGTTCATCTGTTAGAAAGTTTCTTTTTTTAGGGGGTCTTATTTGTCCGGTTTCCAAATC
CCTGACTTGATAATTTGCGATTTCGAGAAATCTATAGTCTCTGTAGACACTGTGACGCCTTGGTCCGGTC
GTGTTTTTGGTATAAAAAGGAGAAATTTCTACTGTATCACCTGTCGCCATTCCAAAGTAATCATACGGGT
ATACAGATCTAGCCTGTAGATATTCCACAACACAGTCGACCGATGTAGACGTTCGGTATCCCAGGGTTTG
ATGTCGCTTAGTAAAGTTAGTTGTATGAAACGCCTTGGAGACAGTTGATCTTAACAGTGATGGAACCAGG
GGCAATTTTTTTTCTGCTTCATCATTGTCGTAAGCTTCAAAAAACATGAAATTTTTATGATACGTTGCTT
TGGATGAGCATTCTCCCGATCGATCAATCCTGACAATTTCATGATAGTCTATTGGAACCCTGGTCACGTA
CTCATTTGTTATTTGGGGTCTTGAGAATAATGCCCACGTAGTAACTGTGGTTATATGTTTATAGTATAGA
GTCACATTAAAGACGTACGGGGCAATGTTTTGCTTGAAGACTACGGCAATTCCTTCAGTCATGTTAGTCG
AATCGGCATGTCGGTGACAATGTCGTGGCTGGGCAAGCCTCGCAACACTGGCGCCAGTTGGAGATGAGCA
CGCAAAAATTCTGTTTCTAATCTGGGGTTCTTTCGGTGCCCCCGACCCAATGGCTTCGGAGAAAGAGATT
TTTCCAACATCCATGCTGGCTGTATCACGAGGGTCTATTATTCCAGCAATTCCGTGTGAATCTTGAGATA
GGGTAGATGGGATCAGGATTGCCACGCACACGCAGATCAGCATTTTCAAGCTAGCCATGTCAATGTTCAC
GGCGATGTAGGATTGCA
Protein Information
Protein Name envelope glycoprotein B
NCBI Protein GI 57790952
Protein Accession YP_182356
Protein pI 6.82
Protein Weight 94517.88
Protein Length 883
Protein Sequence 
>YP_182356.1 envelope glycoprotein B [Gallid alphaherpesvirus 1]
MQSYIAVNIDMASLKMLICVCVAILIPSTLSQDSHGIAGIIDPRDTASMDVGKISFSEAIGSGAPKEPQI
RNRIFACSSPTGASVARLAQPRHCHRHADSTNMTEGIAVVFKQNIAPYVFNVTLYYKHITTVTTWALFSR
PQITNEYVTRVPIDYHEIVRIDRSGECSSKATYHKNFMFFEAYDNDEAEKKLPLVPSLLRSTVSKAFHTT
NFTKRHQTLGYRTSTSVDCVVEYLQARSVYPYDYFGMATGDTVEISPFYTKNTTGPRRHSVYRDYRFLEI
ANYQVRDLETGQIRPPKKRNFLTDEQFTIGWDAMEEKESVCTLSKWIEVPEAVRVSYKNSYHFSLKDMTM
TFSSGKQPFNISRLHLAECVPTIATEAIDGIFARKYSSTHVRSGDIEYYLGSGGFLIAFQKLMSHGLAEM
YLEEAQRQNHLPRGRERRQAAGRRTASLQSGPQGDRITTHSSATFAMLQFAYDKIQAHVNELIGNLLEAW
CELQNRQLIVWHEMKKLNPNSLMTSLFGQPVSARLLGDIVAVSKCIEIPIENIRMQDSMRMPGDPTMCYT
RPVLIFRYSSSPESQFSANSTENHNLDILGQLGEHNEILQGRNLIEPCMINHRRYFLLGENYLLYEDYTF
VRQVNASEIEEVSIFINLNATILEDLDFVPVEVYTREELRDTGTLNYDDVVRYQNIYNKRFRDIDTVIRG
DRGDAIFRAIADFFGNTLGEVGKALGTVVMTAAAAVISTVSGIASFLSNPFAALGIGIAVVVSIILGLLA
FKYVMNLKSNPVQVLFPGAVPPAGTPPRPSRRYYKDEEEVEEDSDEDDRILATRVLKGLELLHKDEQKAR
RQKARFSAFAKNMRNLFRRKPRTKEDDYPLLEYPSWAEESEDE
Vaxign Prediction
Localization(Probability)
(Prob.=0)
Adhesin Probability 0.068
Trans-membrane Helices 2
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope