VIOLIN: Vaccine Investigation and Online Information Network

M membrane protein

General Information

Protegen ID

1707

Sequence Strain (Species/Organism)

Infectious bronchitis virus

Taxonomy ID

11120

Molecule Role

Protective antigen

Related Vaccines(s)

IBV DNA vaccine pVAX1-16S1/M/N , Infectious Bronchitis Virus DNA Vaccine encoding S1, N, and M

References

Gene Information

Gene Name

M membrane protein

NCBI Gene ID

1489743

Genbank Accession

M22014

Locus Tag

IBVgp4

Gene Starting Position

24504

Gene Ending Position

25181

DNA Sequence

>NC_001451.1:24504-25181 Avian infectious bronchitis virus, complete genome
GATGCCCAACGAGACAAATTGTACTCTTGACTTTGAACAGTCAGTTCAGCTTTTTAAAGAGTATAATTTA
TTTATAACTGCATTCTTGTTGTTCTTAACCATAATACTTCAGTATGGCTATGCAACAAGAAGTAAGGTTA
TTTATACACTGAAAATGATAGTGTTATGGTGCTTTTGGCCCCTTAACATTGCAGTAGGTGTAATTTCATG
TACATACCCACCAAACACAGGAGGTCTTGTCGCAGCGATAATACTTACAGTGTTTGCGTGTCTGTCTTTT
GTAGGTTATTGGATCCAGAGTATTAGACTCTTTAAGCGGTGTAGGTCATGGTGGTCATTTAATCCAGAAT
CTAATGCCGTAGGTTCAATACTCCTAACTAATGGTCAACAATGTAATTTTGCTATAGAGAGTGTGCCAAT
GGTGCTTTCTCCAATTATAAAGAATGGTGTTCTTTATTGTGAGGGTCAGTGGCTTGCTAAGTGTGAACCA
GACCACTTGCCTAAAGATATATTTGTTTGTACACCGGATAGACGTAATATCTACCGTATGGTGCAGAAAT
ATACTGGTGACCAAAGCGGAAATAAGAAAAGGTTTGCTACGTTTGTCTATGCAAAGCAGTCAGTAGATAC
TGGCGAGCTAGAAAGTGTAGCAACAGGAGGAAGTAGTCTTTACACATA

Protein Information

Protein Name

membrane protein

NCBI Protein GI

9626542

Protein Accession

NP_040835

Protein pI

8.3

Protein Weight

23788.52

Protein Length

225

Protein Note

ORF for gene 4

Protein Sequence

>NP_040835.1 membrane protein [Infectious bronchitis virus]
MPNETNCTLDFEQSVQLFKEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWPLNIAVGVISC
TYPPNTGGLVAAIILTVFACLSFVGYWIQSIRLFKRCRSWWSFNPESNAVGSILLTNGQQCNFAIESVPM
VLSPIIKNGVLYCEGQWLAKCEPDHLPKDIFVCTPDRRNIYRMVQKYTGDQSGNKKRFATFVYAKQSVDT
GELESVATGGSSLYT

Vaxign Prediction

Localization(Probability)

(Prob.=0)

Adhesin Probability

0.428

Trans-membrane Helices

Detailed Vaxign Results

Vaxign Results

Epitope Information

IEDB Linear Epitope