env |
| General Information |
| Protegen ID |
1708 |
|
Sequence Strain (Species/Organism) |
Simian-Human immunodeficiency virus strain SHIV89.6P |
|
Taxonomy ID |
57667
|
|
Other Database IDs |
CDD:278917 |
|
Molecule Role |
Protective antigen |
| Related Vaccines(s) |
DNA and poxvirus priming-boosting SHIV vaccine
,
HIV DNA vaccine SIVmac239 Gag-Pol-Nef and mock Env with rAd5 boost
|
| References |
|
| Gene Information |
|
Gene Name |
env |
| Protein Information |
|
Protein Name |
envelope protein |
|
NCBI Protein GI |
72398919
|
|
Protein pI |
9.92 |
|
Protein Weight |
40473.44 |
|
Protein Length |
461 |
|
Protein Note |
Envelope glycoprotein GP120; pfam00516 |
|
Protein Sequence |
>AAZ72871.1 envelope protein, partial [Simian-Human immunodeficiency virus]
LNCTNLNITKNTTNPTSSSWGMMEEGEIKNCSFYITTSIRDKVKKEYALFNRLDVVPVENTSYRLISCNT
SVITQACPKVSFQPIPIHYCVPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEE
DIVIRSENFTNNVKNIIVQLNESVVINCTRPNNNTRERLSIGPGRAFYARRNIIGDIRQAHCNISRAKWN
NTLQQIVIKLREKYRNKTIAFNQSSGGDPEIVMHSFNCGGEFFYCNTAQLFNSTWNVTGGTNGTKGSDII
TLQCRIKQIINMWQKVGKAMYAPPIKGQIRCSSNITGLLLTRDGGSSTETEPEIFRPGGGDMRDNWRSEL
YKYKVVRIEPIGVAPTRAKRRTVQREKR
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
Starting position |
Ending position |
| 101098 |
NTTNPT |
11 |
17 |
| 145746 |
DPEIVMHSF |
238 |
247 |
|
|
|
LNCTNLNITKNTTNPTSSSWGMMEEGEIKNCSFYITTSIRDKVKKEYALFNRLDVVPVENTSYRLISCNTSVITQACPKVSFQPIPIHYCVPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEDIVIRSENFTNNVKNIIVQLNESVVINCTRPNNNTRERLSIGPGRAFYARRNIIGDIRQAHCNISRAKWNNTLQQIVIKLREKYRNKTIAFNQSSGGDPEIVMHSFNCGGEFFYCNTAQLFNSTWNVTGGTNGTKGSDIITLQCRIKQIINMWQKVGKAMYAPPIKGQIRCSSNITGLLLTRDGGSSTETEPEIFRPGGGDMRDNWRSELYKYKVVRIEPIGVAPTRAKRRTVQREKR
|