VIOLIN: Vaccine Investigation and Online Information Network

gag

General Information

Protegen ID

1717

Sequence Strain (Species/Organism)

Human immunodeficiency virus 2

Taxonomy ID

11709

Other Database IDs

CDD:249943
CDD:279002
CDD:197667

Molecule Role

Protective antigen

Related Vaccines(s)

ALVAC-HIV-2 , ALVAC-HIV-2- env/gag/pol , HIV-2 DNA vaccine

References

Gene Information

Gene Name

gag

Protein Information

Protein Name

gag polyprotein

NCBI Protein GI

1845205

Protein pI

9.25

Protein Weight

55390.11

Protein Length

591

Protein Note

similar to HIV2BEN, GenBank Accession Number M30502, and to HIV2D194, GenBank Accession Number J04542

Protein Sequence

>AAB47780.1 gag polyprotein [Human immunodeficiency virus 2]
MGARNSVLRGKKADELEKIRLRPGGKKKYRLKHIVWAANELDRFRLAENLLESKEGCQKILTVLDPLVPT
GSENLKSLFNTVCVIWCLHAEEKVKDTEEAKKLVQRHLVAETGTAEKMPNTSRPTAPPSGKGGNFPVQQA
GGNYVHVPLSPRTLNAWVKLVEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDQQAAMQIIREIINEE
AADWDAQHPIPGPLPAGQLRDPRGSDIAGTTSTVDEQIQWMYRQQNPVPVGNIYRRWIQIGLQKCVRMYN
PTNVLDVKQGPKESFQSYVDRFYKSLRAEQADPAVKNWMTQTLLVQNANPDCKLVLKGLGMNPTLEEMLT
ACQGVGGPGQKARLMAEALKEALTPPPIPFAAAQQRRTIRCWNCGKEGHSAKQCRAPRRQGCWKCGKPGH
IMANCPDRQAGFLGMGSRGKKPRNFPVAQAPQGLIPTAPPADPAADLLEKYLQQGRKQREQRERPYKEVT
EDLLHLEQGETPRREATEDLLHLNSLFGKDQ

Epitope Information

IEDB Linear Epitope