StxB2 |
General Information |
Protegen ID |
225 |
Sequence Strain (Species/Organism) |
Enterobacteria phage 933W |
VO ID |
VO_0010938
|
Taxonomy ID |
10730
|
Molecule Role |
Protective antigen |
Related Vaccines(s) |
rBCG -Stx2B (Escherichia coli )
,
Shiga Toxin 2 B Subunit Vaccine
|
References |
|
Gene Information |
Gene Name |
StxB2 |
NCBI Gene ID |
1262010
|
Genbank Accession |
AF125520 |
Locus Tag |
ST933Wp41 |
Gene Starting Position |
22432 |
Gene Ending Position |
22701 |
DNA Sequence |
>NC_000924.1:22432-22701 Enterobacteria phage 933W, complete genome
CATGAAGAAGATGTTTATGGCGGTTTTATTTGCATTAGCTTCTGTTAATGCAATGGCGGCGGATTGTGCT
AAAGGTAAAATTGAGTTTTCCAAGTATAATGAGGATGACACATTTACAGTGAAGGTTGACGGGAAAGAAT
ACTGGACCAGTCGCTGGAATCTGCAACCGTTACTGCAAAGTGCTCAGTTGACAGGAATGACTGTCACAAT
CAAATCCAGTACCTGTGAATCAGGCTCCGGATTTGCTGAAGTGCAGTTTAATAATGACTG
|
Protein Information |
Protein Name |
Shiga toxin 2 subunit B |
NCBI Protein GI |
9632507
|
Protein Accession |
NP_049501 |
Protein pI |
4.98 |
Protein Weight |
9278.79 |
Protein Length |
89 |
Protein Sequence |
>NP_049501.1 Shiga toxin 2 subunit B [Enterobacteria phage 933W]
MKKMFMAVLFALASVNAMAADCAKGKIEFSKYNEDDTFTVKVDGKEYWTSRWNLQPLLQSAQLTGMTVTI
KSSTCESGSGFAEVQFNND
|
Vaxign Prediction |
Localization(Probability) |
Periplasmic (Prob.=0.984) |
Adhesin Probability |
0.525 |
Trans-membrane Helices |
0 |
Detailed Vaxign Results |
Vaxign Results |
Epitope Information |
IEDB Linear Epitope |
|
IEDB ID |
Epitope |
MHC restriction |
Starting position |
Ending position |
IEDB ID |
Epitope |
Starting position |
Ending position |
99137 |
DDTFTV |
35 |
41 |
99163 |
DTFTVK |
36 |
42 |
|
|
MKKMFMAVLFALASVNAMAADCAKGKIEFSKYNEDDTFTVKVDGKEYWTSRWNLQPLLQSAQLTGMTVTIKSSTCESGSGFAEVQFNND
|