VIOLIN: Vaccine Investigation and Online Information Network

RpsL

General Information

Protegen ID

236

Sequence Strain (Species/Organism)

Brucella melitensis bv. 1 str. 16M

VO ID

VO_0010963

Taxonomy ID

224914

Molecule Role

Other

Related Vaccines(s)

B. melitensis vaccine strain Rev. 1

References

Gene Information

Gene Name

RpsL

NCBI Gene ID

1196463

Genbank Accession

NZ_GG703780

Chromosome No

Locus Tag

BMEI0752

Gene Starting Position

782951

Gene Ending Position

783322

DNA Sequence

>gi|17986284:782951-783322 Brucella melitensis 16M chromosome I, complete sequence
AATGCCTACCGTAAACCAGCTTATCCGCAAGCCGCGCACTGCGCCGGTGAAGCGCAATAAGGTTCCTGCA
CTGCAGGCAAACCCTCAGAAGCGCGGCGTTTGCACCCGCGTTTACACGACGACCCCGAAGAAGCCGAACT
CGGCTCTGCGTAAGGTTGCCAAGGTTCGTCTGACGAACGGCTTTGAAGTCATTGGTTATATCCCTGGTGA
AGGGCATAACCTGCAGGAGCACTCCGTCGTGATGATCCGTGGCGGTCGTGTGAAGGACTTGCCGGGTGTG
CGTTACCACATCATCCGTGGCGTTCTCGATACCCAGGGTGTCAAGAACCGCAAGCAGCGCCGTTCCAAGT
ACGGTGCAAAGCGTCCGAAGTA

Protein Information

Protein Name

30S ribosomal protein S12

NCBI Protein GI

161511151

Protein Accession

NP_539669

Protein pI

12.15

Protein Weight

12482.71

Protein Length

123

Protein Note

interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance

Protein Sequence

>gi|161511151|ref|NP_539669.2| 30S ribosomal protein S12 [Brucella melitensis 16M]
MPTVNQLIRKPRTAPVKRNKVPALQANPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVIGYIPGE
GHNLQEHSVVMIRGGRVKDLPGVRYHIIRGVLDTQGVKNRKQRRSKYGAKRPK

Epitope Information

IEDB Linear Epitope