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GNA33

General Information
Protegen ID 270
Sequence Strain (Species/Organism) Neisseria meningitidis MC58
VO ID VO_0010978
Taxonomy ID 122586
Molecule Role Protective antigen
Molecule Role Annotation Protective antigen (Pizza et al., 2000)
COG COG2821M, under M: Cell wall/membrane/envelope biogenesis
References
Pizza et al., 2000: Pizza M, Scarlato V, Masignani V, Giuliani MM, Aricò B, Comanducci M, Jennings GT, Baldi L, Bartolini E, Capecchi B, Galeotti CL, Luzzi E, Manetti R, Marchetti E, Mora M, Nuti S, Ratti G, Santini L, Savino S, Scarselli M, Storni E, Zuo P, Broeker M, Hundt E, Knapp B, Blair E, Mason T, Tettelin H, Hood DW, Jeffries AC, Saunders NJ, Granoff DM, Venter JC, Moxon ER, Grandi G, Rappuoli R. Identification of vaccine candidates against serogroup B meningococcus by whole-genome sequencing. Science (New York, N.Y.). 2000; 287(5459); 1816-1820. [PubMed: 10710308].
Gene Information
Gene Name GNA33
NCBI Gene ID 902136
Genbank Accession AE002098
Locus Tag NMB0033
Gene Starting Position 30910
Gene Ending Position 32235
DNA Sequence
>NC_003112.2:30910-32235 Neisseria meningitidis MC58 chromosome, complete genome
TTTACGGGCGGTATTCGGGCTTCATACCGTTGGGTAGGAGCTGCCAGACATATCCCGTGGTTTTCTGTTT
GCCGGCAAGTTCGCCGGCTTCGTCGCCGTATCCCCAAAAATAATCCACGCGCACCGCGCCTTTAATCGCG
CTGCCGGTATCCTGCGCCATAATCAGGCGGTTGAGGGCTTTGCGGGTAACCGGATGGGCGGTGGCGACAA
ATAAGGGCGCACCCAAGGTAATGTAGTGCCGGTCGACTGCGCCGGCATATTCCCCCATCAGCGGCGTGCC
CAGTGCGCCGACAGGGCCGTCATTGCTGCTTCCGGCAAGCTCGCGGAAAAAGATATAGCTGGGGTTTTGA
CCCAAAACTTCGGCGAGGCGTTGCGGATTTTGCCGCATATAAGACTTAATGCCCTGCATGGAGGTTTGTC
CGAGTTTGAGGTAGCCCTTATCCGCCATATAGCGTCCGATGGAAACGTAGGGATGTTCGTTTTTGTCGGC
ATAGCCGATGCGGATGTATTTGCCGGACGGGGTTTTCAGACGGCCCGAGCCTTGGATGTGCATAAAAAAA
AGTTCGACAGGGTCTTCGGCGTAACCGAGTATCGGGGCTTTGCCGTCAAGCGCGCCGCCGTTGATTTGGT
TGCGCGTGTGGTAGGGGAGGAAGCGGCTTCCTTCAAACCTGCCTTTGATTGCTGTTGTGCGCGCGGTGAT
GGGGAATCGGGAGAGGTCGGCGGTATGTGTGCCGCCGGTATTGTCGATTGTGCCGCTGTTTTTTCCCGTC
TGCCTGATGCGGACAAGGGCTTTTCCGCTCCGCAAACCGGCAGGCAGGGGGACGGAGATAAAATCGTCGG
GAATACCGTAAATCGGGAAGCGGGCTTGTGCCGTCCGCCTGTCGTCGCCCTTCAGCACCGGTTCGTAATA
GCCGGTAACCGTACCGGCAAGGCTTCCGTTGCCTGCAACCTGCCACGGCGTGAAATAGCGTTCAAAAAAC
TGTTTTGCCTGAAAGGAATGGACGGGGGTTTGAAAGGCTTGGGCGCACACATCCTGCCAGCCTTGGCGGT
TTTTCAAATTGGCGCAGCCGAGGCGGAAGGATTGCAGGCTTTTGGCGAAATCCTGCGCCGCCCAGTGGGG
CAGGGACAGGTGCGGTACAACGGTATAGACGGCCCCGCCGCCGCCGACCGTCGTTCCGGCGGGGTCGGGG
ATGCCGACCGGCCGGTCCGGGCCGTTGATGACGGATGTGTCGGGTTGCGGAAAGGTTTGGATGCTCTTGC
TTTGGCAGGCGGCGAGGATGGCGGCGGCGATGCCGTACAGGGCGGCGCGGAATAGGTATTTTTTCA

Protein Information
Protein Name membrane-bound lytic murein transglycosylase A
NCBI Protein GI 15675973
Protein Accession NP_273099
Protein pI 10.02
Protein Weight 45724.72
Protein Length 441
Protein Note identified by similarity to GP:974447; match to protein family HMM PF03562; match to protein family HMM PF06725
Protein Sequence
>NP_273099.1 membrane-bound lytic murein transglycosylase A [Neisseria meningitidis MC58]
MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPVGIPDPAGTTVGGGGAVYTVVPHLSLP
HWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGY
YEPVLKGDDRRTAQARFPIYGIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSRFPI
TARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYA
DKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFFRELAGSSNDGPVGALG
TPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGK
QKTTGYVWQLLPNGMKPEYRP

Vaxign Prediction
Localization(Probability) Outer Membrane
(Prob.=0.992)
Adhesin Probability 0.759
Trans-membrane Helices 0
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope