VIOLIN Logo
VO Banner
Search: for Help
Protegen Home
Introduction
Statistics
News and Updates
Protegen Query
Protegen BLAST
Selected Bacteria
Brucella spp. (26)
B. anthracis (14)
E. coli (40)
M. tuberculosis (26)
N. meningitidis (18)
Selected Viruses
Ebola virus (19)
HIV (41)
Influenza virus (50)
Selected Parasites
Plasmodium (47)
Data Submission
Data Exchange
Data Download
Documentation
FAQs
Disclaimer
Contact Us
UMMS Logo


GNA1030

General Information
Protegen ID 275
Sequence Strain (Species/Organism) Neisseria meningitidis MC58
VO ID VO_0010983
Taxonomy ID 122586
Molecule Role Protective antigen
Molecule Role Annotation Protective antigen as shown in some assays (Giuliani et al., 2006)
COG COG2353S, under S: Function unknown
References
Giuliani et al., 2006: Giuliani MM, Adu-Bobie J, Comanducci M, Aricò B, Savino S, Santini L, Brunelli B, Bambini S, Biolchi A, Capecchi B, Cartocci E, Ciucchi L, Di Marcello F, Ferlicca F, Galli B, Luzzi E, Masignani V, Serruto D, Veggi D, Contorni M, Morandi M, Bartalesi A, Cinotti V, Mannucci D, Titta F, Ovidi E, Welsch JA, Granoff D, Rappuoli R, Pizza M. A universal vaccine for serogroup B meningococcus. Proceedings of the National Academy of Sciences of the United States of America. 2006; 103(29); 10834-10839. [PubMed: 16825336].
Gene Information
Gene Name GNA1030
NCBI Gene ID 903167
Genbank Accession AE002098
Locus Tag NMB1030
Gene Starting Position 1045039
Gene Ending Position 1045602
DNA Sequence 
>NC_003112.2:1045039-1045602 Neisseria meningitidis MC58 chromosome, complete genome
TTTATTGTTTGGCTGCCTCGATTTGGATGTCGATGCGGACGCTTTTGGTCATACCAACGTTAACGAGGTA
GTCCATGCCCCATTTGGTGCGGTCGATGGTGGTGCTGAAGTCGCCGCCACAAACTTCGGTTTTCTCCATC
GGGCTTTGGTAGCAGTTGAATTTTTCGGCTTTGAGTTTGACGGGGGCGGTTTTGCCGTGCATGGTCAGGT
TGCCGTCAACGGAAACCAGTTTTTTGCCGTTGAAGTTGAATTTGGTGGAAACAAAGCGGATGTCCGGATA
TTGGGCGGCATCGAAGATGTCGGCTGATTTCAGGTGGTCGGTAAAGTGTTGCGAACCGCTTTGCAGGTTG
GCAATGGGGATGGTGATGTCGATTTTACCGTCGCGTTTTGCTTGGTCGAACTCGACGGAACCGGTCAGAC
CGTAAAAACCGCCGACGTTGGTGCTGGTGTTGAAATGGTCGATGGCGAAACGGGCGTTGGCGTGATATTC
GTCCACTTTGTAGGTGGCGGCGGAGGCAGTACTGATGGCGGCGGCTGCGAGTGCGGCGAAGATGATTTTT
TTCA
Protein Information
Protein Name hypothetical protein
NCBI Protein GI 15676917
Protein Accession NP_274064
Protein pI 8.65
Protein Weight 19439.53
Protein Length 187
Protein Note identified by similarity to EGAD:89838; match to protein family HMM PF04264
Protein Sequence 
>NP_274064.1 hypothetical protein NMB1030 [Neisseria meningitidis MC58]
MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNVGGFYGLTGSVEFDQAKRDGKIDITIP
IANLQSGSQHFTDHLKSADIFDAAQYPDIRFVSTKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQ
SPMEKTEVCGGDFSTTIDRTKWGMDYLVNVGMTKSVRIDIQIEAAKQ
Vaxign Prediction
Localization(Probability) Unknown
(Prob.=0.25)
Adhesin Probability 0.727
Trans-membrane Helices 0
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope