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Spa32

General Information
Protegen ID 288
Sequence Strain (Species/Organism) Shigella flexneri 5a str. M90T
VO ID VO_0010992
Taxonomy ID 1086030
Molecule Role Protective antigen
Molecule Role Annotation S. flexneri M90T is a colonisation-defective mutant with a transposon in fnr, which encodes a regulator of anaerobic metabolism. To establish whether FNR-mediated repression of spa32 and spa33 contributes to increased Shigella entry into cells in an anaerobic cabinet, recombinant M90T strains were constructed which contain spa32 and spa33 under the control of either their native promoters (M90Tp32/33) or promoters with disrupted FNR boxes (M90Tp#32/#33).The presence in M90T of spa32 and spa33 alleles that are not repressed by FNR led to IpaB secretion during anaerobic growth, and loss of the increased entry of Shigella into cells in an anaerobic cabinet (Marteyn et al., 2010).
References
Marteyn et al., 2010: Marteyn B, West NP, Browning DF, Cole JA, Shaw JG, Palm F, Mounier J, Prévost MC, Sansonetti P, Tang CM. Modulation of Shigella virulence in response to available oxygen in vivo. Nature. 2010; 465(7296); 355-358. [PubMed: 20436458].
Gene Information
Gene Name Spa32
NCBI Gene ID 876502
Genbank Accession AF348706
Locus Tag pWR501_0160
Plasmid No pWR501
Gene Starting Position 123961
Gene Ending Position 124839
DNA Sequence
>NC_002698.1:123961-124839 Shigella flexneri 5a virulence plasmid pWR501, complete sequence
TATGGCATTAGATAATATAAACCTAAATTTTAGTAGTGACAAACAGATAGAAAAATGTGAGAAACTATCT
TCAATAGATAATATTGATAGTCTCGTTTTGAAGAAGAAGAGGAAGGTTGAAATTCCTGAGTACTCTTTAA
TTGCATCTAACTATTTTACTATTGATAAGCACTTTGAACATAAGCATGATAAAGGAGAAATTTATAGTGG
CATTAAAAATGCGTTCGAACTTAGAAACGAACGAGCGACATATTCTGATATTCCAGAATCAATGGCCATT
AAAGAAAATATTTTGATACCAGATCAAGATATCAAAGCAAGGGAAAAAATAAATATCGGCGATATGAGGG
GGATCTTTTCATATAATAAGAGTGGAAATGCAGACAAGAACTTCGAAAGAAGTCATACTTCTTCTGTAAA
CCCTGATAATCTGCTAGAATCTGATAATAGAAATGGTCAAATTGGTTTAAAAAATCATAGCTTGTCTATT
GATAAGAATATTGCTGACATCATTTCTTTACTAAATGGAAGTGTTGCTAAATCATTTGAGCTGCCTGTAA
TGAATAAAAATACTGCAGACATAACCCCATCCATGTCATTGCAAGAAAAATCAATAGTTGAAAATGATAA
AAATGTTTTTCAAAAAAATAGTGAAATGACTTACCACTTTAAACAGTGGGGGGCTGGACATTCTGTTAGT
ATTTCAGTGGAGTCTGGTTCTTTTGTTCTAAAACCGTCAGATCAATTTGTAGGAAATAAACTTGACTTAA
TTTTGAAACAAGATGCTGAGGGTAATTACAGATTTGATAGCAGTCAACATAATAAGGGGAATAAAAATAA
TAGTACAGGATATAATGAACAGAGTGAAGAAGAATGCTA

Protein Information
Protein Name invasion protein
NCBI Protein GI 13449098
Protein Accession NP_085314
Protein pI 5.89
Protein Weight 31884.85
Protein Length 292
Protein Note residues 1 to 292 of 292 are 100.00 pct identical to residues 1 to 292 of 292 of product encoded by GenBank Accession Number D50601 ORF20 [Shigella sonnei]
Protein Sequence
>NP_085314.1 invasion protein (plasmid) [Shigella flexneri 5a str. M90T]
MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEYSLIASNYFTIDKHFEHKHDKGEIYSG
IKNAFELRNERATYSDIPESMAIKENILIPDQDIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVN
PDNLLESDNRNGQIGLKNHSLSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDK
NVFQKNSEMTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKGNKNN
STGYNEQSEEEC

Epitope Information
IEDB Linear Epitope