VIOLIN: Vaccine Investigation and Online Information Network

EXOSC3

General Information

Protegen ID

3545

Sequence Strain (Species/Organism)

Homo sapiens

Taxonomy ID

9606

Molecule Role

Protective antigen

Related Vaccines(s)

2008â€“2009 trivalent influenza vaccine

References

Gene Information

Gene Name

EXOSC3

NCBI Gene ID

51010

Genbank Accession

AL138752

Chromosome No

Gene Starting Position

37779713

Gene Ending Position

37785091

DNA Sequence

>NC_000009.12:37779713-37785091 Homo sapiens chromosome 9, GRCh38.p12 Primary Assembly
CTTGGTCTTTATCAACAAATAGAGTTCTATAATCTCTTTGATCCAAAAAGGACTTTCTATGGATAGGCTT
CAGGGGATCTGTATCTCACATATTCTCAGAGGTCTAGAAACCAAGAATCACTGATGTGGATCACCTGGCA
GTCTCTTTACCTCTAAAGGTTTTGGTTAATATACTAAATAGCATAGAAGAGTTTTCTATGCTTAGCTCCT
AGGAAATGATTTTAGCAAAATAAGACTTGGCCAGATTTGGATTCAGAAATCCTCATAGTGTTATTTATAT
AATGATAAAACTCAAAAATATCCTGTAACATGAAATATGTGACTAAAGTTGTGAAATGTATCATGCTGTT
TGAAGTAGACAAAAGTATATTACAAAGTGGCATATAAGCTATAATAACTATAATTTCAATTTGATGAATA
TAGAGAATGTAGGCCAAGTTAAATTCTGTGCCTCAGTTTCAATTATGAGGATAAGTGTCTTCTGCAGTTA
GAATAAAGGAGTTAATCCATGCAAAACACAATACTTGGTAAATGAAAAAGTATTTCGTTGTTATATACTC
ACCCGCTGAATAATGGGACTACAGGTGACATTTCTTTGCTGCTTTATACTTAGGTATTCCACATTTCCTC
TGGTGAACCTGGCTTACTGTTATAATCACAAAATTATTTTACTGCTGACCTCCAGTTAATTATGGAAGCT
GTAGCAATTACTAAGGGAGTTAACTCCAAATAAACCCTAATACTGTTTTTTAGTAAACTTTATTGTACCG
AACAAAAAAAATGATTTTGCAATGATTTTCTCTCCCACAAAAGCGTGGGTGAAAACCAGTAACTTATAAA
AATACTTTCGGACTCTAATAATACATACATTCACACCTTATCTTCTGAGTATTTAAATGGGGGAGGTTCA
CCTGAAAAAACCCATAGTTTTTTGCCTCAACTGACCTGTAAAAAAGTCCACCTATATCAACTTTCTGCCA
ATCTGGAGAAGATCTGTTTTCTTTGATCTGACGTCATGTGTTCACAAGCTTCTAAAATGTTTGCCAAAAT
TAAAGTCTGCTGGATGGTTTTTGCCTTAACCCATATTCTTCCATTCATTCCAAATACTATCTCCAGTGGA
TAGAGTTTTCCCACTTCCTGTATGATTTCACAATCTGGAGCTAATAGCCTGGTGGGAAGAGAAAAGAAAA
TGAAATTTAATGAAGTGGCAAAGGTGTGTCCGGAGTCTCCTTTAGAATGTGATTCCTTTTCTGAGCAGTT
CTCCATAGCTGTTCAACAAGAACAAGGCACGTGATGACATTTGCTGCCTCCTTTCTTCCAAGAAGGAACT
TTACACTGTTCAAAGGTATACTAGAAATCACAGAGGTGGGCTATGCCTTACAAAGAAATCAAACTCCCTA
GGTTACCAACTTTGTAAAAGTCATTCCCCTAGATGGTCAGAGCACTTTAATTCTAGACTGGGAATCATAA
CTTTTTTTATCTACAGTGTTAAGACACTTTAAACTTATTTTCCTGGCCATATTATTCTCTTGTGTTAAAT
TCAGTACTTGGAGAGGAACATTGGCTCTTTCAAACCATAAGGGTGGTGCTTGGTTAATAACATGCTTCTT
GGTTAAAAACATGCTTCTCTGATGTCCAAACTTAATTCTCCAGATCTTTAGGATATGTAGTAAGGAGAGG
CATACAAGATAGCTCTCAACTTCACTGGCTCTAGGAGTAAAGCCCCTGAATATGGCACAGCTTTGGGTGG
GTAAAGTTCTAAACACCAAAAAGAGAATCTGCCTCAGCATGAACCTCAGTATGCCTCAGTATGACCAAGT
GTCAGAAGCCTTCTGTGAATGTCTACATAACCTTGAACATCACAATCTAAGCTGCGTGTGACCCCCATAA
TTAGAAAAAATTGATAATTTTATACAACTGCAGACTGCATCTGTATTCAAGTGACTCAGAACAGGGGAAA
GGCCAGTTTTCACATTTGGGCTAAGTCAAATAAGCAACAGGCCTGGGAAGGAAGATATGAATACAGAGTA
AGAGCTTAAGGCATGAAGTATCAGCCCACCAGAAACTACACAGCCAAACACATCTGAATTTGATATGTTT
CCAAGAAGATAGGATTAAATTCATGAGTTTCCAAATGTGTTAAAATGGATACTGATTTCTAACTCTGAGG
AGAAATTCAAACGTTACAAAGAATCTGAATCCTGAAGATTAACCAACTTTCCAAGAATGTATAATTATAA
AAAGCAGTCAAGCCAGCAGACATCAGGACTTACTTTCTAATTAAGCCCAGAGTCACTTTAAAAAGCAGAC
CATCCTGTCCAATGACACCCATTCCATTGGCTCGTCCACAGCTGTCAATACAGACCATCTCTGGTTCCAT
GTCTTTATTAGCAACCACAAACTGGCCATAGATGAGATCTCCAACCTACAATGATATTAAAAACCAGTTC
ATTTCCTCTCAGCAAACTACAGGTGCTACTATTGGTTCTTTCTCACAGGCATCAATGCCAGCCACCTACA
GTTCTGTGGCTAAGGGACTGACTGCACTATAGGATTCCCACAGTCACTTTGGAGTTGAGTCTTGGGGAAA
AAAAGGAACACATGTATCATTCCCTTTCACCAATCAGGAAATCACAGACGAGGAGCCATCTCAAGGCCAG
AGAACACTAGGATTGCACTGTCCAATATGGTAGATAGCCAATTGTTTAAACTTACATTTAAATTAAAATT
AGGTATTTAAAATTAATTTCCTGAGTTGCATTAGCCACATTTCAAGTGCTCAACAGCTAGTGGCTACCAT
ACTAATCAGTGCAGATACAAAACAGCATCACTGTAGAAAGTTATATTAGGTCGCACTACCCTAGAGAATT
ACAGATTTACAGAGAAAGGAAGGAACTCCGGCATGCAAATTATTCAAAGCAAAATCAAACAATAATTCAC
TGACACTTCTCCCTGCAGGATTTACTTAAAAACCTCATAGAGCTAAACTTCAAAGGGACGAAACTGAGGA
AATGGAGAGTGAACTCATTCTGTTCACTCAACAAAACGTATTAAGTACCTACTGTTTGTTGGTGACTATG
TAAACTAGAAAGGAACAAAACATTCTCTGCTTTTCAGAAGCATTTGGTCTTGGAGGGCAGTGGGGAGGTA
CATATAAACAAACCTCAGTCAAGGCTCAATCCAGTAAGTGCTAGAGCAAAGATACGAGAAAAGTGGCAAC
TAGAGATGGCTTTACAGAGGTGGTCATGTTTAGCCTACGTCTCAAAGAATGAGAATGTGTTCCATAGGGT
GCGAAGGGATAGTGCAATCAAGACAGTGGGAACAGCATGTGCAAATAAGGGCAGGAAATTGAGTTTAATG
GCGTTTGGTGTGATTTGAGTATGGCTGTATGAAGGATATAATTAGGGATGAGGAAAGACACCTGGAGTGT
AATGCCAAGGAATTCTGTAGATTTTGGAGAATCTTGTCTTTTCGAGAAAGTGACCGTGTGAGGATGTCAG
CTCTCAAAATCCTGGATGGTGAGGTAAAAGCGTGGAGGCAGGGATTAATGAAGAAGTGACTGAGACCAGT
CAAGAGGGAGCTGAAGCCTGAACTTGTGGAGATAAAGGGACGGACATGCCAAAGATCAGAGACAGAATCA
AATAGGATCAAAATAGGATTAAGCAACTAAATTTGCATGAGAAGTGAATGAGAAGAGGTGAAGAAATCAC
TAAATTTCAGGCTGGATAGACAAGAAGAGTGTGGCTATGCTACCTGAAAAGCTCAAATTGAAAACCCAAG
GTAACAATATTACTCCTCTATCAGCTCCTAGGACCTACAGCCAGGATGGATGGATAGCTGATAATGTCAA
TTTGCACCACCTGTCCCTCCTCTAAGCCTACAGCAGACATCCTTGTCCAGAGGATATGGACATAACAAAT
AATGGCGATGATAGATACAACCTTTCAACTCAGTAGAAATGAAACATCCCAAGAACAAATGTAGCCAATG
TAAAATAAATTGTAAATGTAAAAAATAATAATAATAATTATGTGGCTCTGATCCTGGAGCATCTGAAGAA
ACTCTTGGAGCCTGGGGCAATTATATACAAGCTCAGAGATCTAGGTCATGCTTTGGAGACAATTCAGATA
GCCTTCTGGATATGTGAGTGTTCTAGGGAATGGATGTTTGTTTCTTTGAAACCAAAGGCTCCCGTAATTA
CCTGCACATTTGGTCTGTTTCTTTTAGTTGCACCTTCAAATGACAAGTAAGACAAAGAAGCTGGCTCACT
CCCTCCAACATCAACTTTGAATATATCTCCAGATTTAGCTGTCACTATGCCAATCACATGGTCTCCTTTT
ACTGGAACATACTACAAAAAGAAACAGAATGAAAAAACAGCCATAAATGACAAGATACCATTGGAAGATA
CCTTCAGCAAGTCCTTTGTGGTTACTTTATTGTCATTAAAGAGAAATCTGATCAAATGCCACTTTCGGTA
AAAGAAAATCACTTCATAAAGTGCCGGGTGTGCAGCTTCTGGTAGTCTGTTAATTGAGTCCAAACTCCAT
TATCTCTTAGGCACCCCAACCAGTAAGTCTCTAGCTTTGTGGCATAAGTCCAGTGGCAAAGGAATCCTTA
CAACCAAGGAAGCCCATTCCATAGACAATTTTTTCTATATGAAATTCTTACCTGTTCTAGGAGAAATTAA
CTCCCTATGACATCCACTCATTGAGCCTAGTCCTGCCCTCTGAGACTCCAAACGGCAGGCCTGCTGTGGG
GTTTTGAAGACTATAATCATGACTCACGGTCTCCAAACGTTTTTCTCTCCTGGTCGCCCTTCTCAGGCTA
TGTTCCTATTGTTCACGGTCCCTCTAAAGGACATGCAGAAGTGGGCACAAGACTACGGTGGCTCTAGGTT
TGCCTGAACAAAAGAGGGCCTCAGGGTCCCTCTCTTCTTTTGGGAGGTCTTCTCAAAGCAGGGCTACCAC
TCTCACTGCCGCACCACCCCTCCGGAGTCCCAGCTCACCCGCTTCTGCTGAGAGTCCACCCAGTAAACAC
CGCCGCCGCTGCCACTGCCGGGCTCCTTGTGACGGAGGCGGCCGCACTTGGTGACCAGCAGGCGGTCCCC
ACAGCGCCGAAGGCCCGGACCGCATACAACGCGCACCCGCGAGCACGCTCTAGCATTCAGGCTCAACGGT
CGCTCCACTGCACCCCCAGGGCCTTCCGCGTCCTCCTGTTCCGGCAGGAGCAGCTCCTCACCCGGGAGCA
CCACCTGACCTAGTACTGTGCGTGCAGCGCGCGCCCTGCTGCCCGCGAGAGATTCAGCCGCGACAGACGC
AGGTTCGGCCATCGCGGGCTCCACCAAACACCGTTTCCGGTACCCGCCTTCCGCTTCCG

Protein Information

Protein Name

transcript variant 2

NCBI Protein GI

50511939

Protein Accession

NP_001002269

Protein pI

9.67

Protein Weight

15462.16

Protein Length

164

Protein Note

Also known as p10; PCH1B; RRP40; Rrp40p; CGI-102; hRrp-40; bA3J10.7

Protein Sequence

>NP_001002269.1 exosome complex component RRP40 isoform 2 [Homo sapiens]
MAEPASVAAESLAGSRARAARTVLGQVVLPGEELLLPEQEDAEGPGGAVERPLSLNARACSRVRVVCGPG
LRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPAS
LSYLSFEGATKRNRPNVQAISSRL

Epitope Information

IEDB Linear Epitope