RPVgp5 F |
| General Information |
| Protegen ID |
3558 |
|
Sequence Strain (Species/Organism) |
Rinderpest virus (strain Kabete O) |
|
Taxonomy ID |
11242
|
|
Molecule Role |
Protective antigen |
| Related Vaccines(s) |
v2RVFH
|
| References |
|
| Gene Information |
|
Gene Name |
RPVgp5 F |
|
NCBI Gene ID |
3021776
|
|
Genbank Accession |
X98291 |
|
Locus Tag |
RPVgp5 |
|
Gene Starting Position |
5457 |
|
Gene Ending Position |
7097 |
|
DNA Sequence |
>NC_006296.2:5457-7097 Rinderpest virus (strain Kabete O), complete genome
CATGAAGATCTTATTTGCTACCCTGCTAGTAGTGACCACCCCTCACTTAGTCACTGGCCAGATCCACTGG
GGCAATCTTTCGAAAATTGGAGTCGTAGGGACGGGTAGTGCTAGTTACAAGGTGATGACCCAATCGAGTC
ACCAGACACTAGTTATAAAGCTGATGCCCAATATCACCGCTATAGACAACTGCACTAAGACTGAGATTGA
GGAGTATAAGAGGCTGTTGGGGACAGTGCTTCAGCCTATTAAGGTCGCTCTGAACGCCATTACTAAGAAT
ATAAAACCAATCAGGAGTTCCACTACCAGTAGGAGACACAGAAGGTTCGCAGGGGTCGCTTTGGCTGGTG
CAGCTCTCGGAGTTGCAACCGCAGCCCAGATTACAGCAGGGATTGCTCTTCATCAATCAATGATGAATAC
CCAGGCTATTGAAAGTCTTAAGGCAAGTCTGGAAACAACTAATCAAGCAATTGAGGAAATACGACAAGCA
GGCCAAGAAATGATCCTAGCAGTTCAAGGTGTCCAGGACTACATCAACAATGAACTGGTACCTGCAATGG
GCCAATTATCGTGTGATATCGTGGGTCAGAAGCTAGGGCTGAAACTGCTCAGATACTACACTGAAATATT
ATCATTATTTGGCCCCAGCCTCAGAGACCCAATTTCGGCCGAGATTTCTATCCAGGCTTTGAGTTACGCC
TTAGGTGGGGACATAAACAAAATACTAGAAAAGCTAGGGTATAGCGGGAGTGATCTCCTTGCTATACTGG
AAAGTAAAGGTATCAAAGCTAAGATAACCTATGTGGATATCGAAAGTTACTTCATTGTGCTCAGCATTGC
CTATCCTTCGCTTTCTGAAATTAAAGGGGTGATAATTCATCGCCTGGAGGGTGTCTCTTACAATATAGGG
TCGCAGGAGTGGTATACCACAGTACCTCGATATGTGGCAACCCAAGGTTACCTCATTTCGAATTTCGATG
ACACACCCTGTGCATTCTCCCCAGAGGGCACTATCTGCAGCCAGAATGCATTATACCCAATGAGCCCACT
CCTCCAGGAATGTTTCCGTGGGTCAACCAGGTCATGCGCTCGTACACTGGTCTCTGGGTCTATAGGGAAT
AGGTTTATCCTATCCAAGGGGAACCTCATTGCCAACTGTGCCTCAATCTTGTGCAAGTGTTACACCACTG
GCTCAATAATAAGTCAAGATCCTGACAAGATCCTAACATATATAGCTGCAGACCAATGCCCCATCGTAGA
AGTGGACGGTGTAACCATCCAGGTTGGGAGCAGAGAGTACCCTGATGCAGTGTACCTGCATAAAATAGAC
CTTGGCCCACCAATATCGCTGGAGAAGCTAGATGTTGGGACTAACCTCGGCAATGCAGTGACAAAACTGG
AGAAAGCCAAGGATCTACTAGATTCATCTGATCTGATCCTGGAAACCATCAAGGGTGCTTCAGTCACGAA
CACAGGCCATATTCTAGTTGGAGCCGGGTTGATTGCAGTAGTGGGTATCCTCATTGTTACCTGTTGCTGT
AGGAAGCGCAGTAATGACAGCAAAGTGTCCACTGTGATATTGAATCCGGGTCTTAAACCAGACCTCACTG
GTACATCCAAATCCTACGTACGGTCACTGTA
|
| Protein Information |
|
Protein Name |
F protein |
|
NCBI Protein GI |
56410434
|
|
Protein Accession |
YP_087124 |
|
Protein pI |
8.22 |
|
Protein Weight |
55061.12 |
|
Protein Length |
546 |
|
Protein Sequence |
>YP_087124.2 F protein [Rinderpest virus (strain Kabete O)]
MKILFATLLVVTTPHLVTGQIHWGNLSKIGVVGTGSASYKVMTQSSHQTLVIKLMPNITAIDNCTKTEIE
EYKRLLGTVLQPIKVALNAITKNIKPIRSSTTSRRHRRFAGVALAGAALGVATAAQITAGIALHQSMMNT
QAIESLKASLETTNQAIEEIRQAGQEMILAVQGVQDYINNELVPAMGQLSCDIVGQKLGLKLLRYYTEIL
SLFGPSLRDPISAEISIQALSYALGGDINKILEKLGYSGSDLLAILESKGIKAKITYVDIESYFIVLSIA
YPSLSEIKGVIIHRLEGVSYNIGSQEWYTTVPRYVATQGYLISNFDDTPCAFSPEGTICSQNALYPMSPL
LQECFRGSTRSCARTLVSGSIGNRFILSKGNLIANCASILCKCYTTGSIISQDPDKILTYIAADQCPIVE
VDGVTIQVGSREYPDAVYLHKIDLGPPISLEKLDVGTNLGNAVTKLEKAKDLLDSSDLILETIKGASVTN
TGHILVGAGLIAVVGILIVTCCCRKRSNDSKVSTVILNPGLKPDLTGTSKSYVRSL
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
Starting position |
Ending position |
| 9614 |
DPDKILTYIAA |
403 |
414 |
| 39061 |
LRDPISAEISIQALS |
217 |
232 |
| 23162 |
GVSYNIGSQEWYTTV |
297 |
312 |
| 50272 |
QAGQEMILAVQGVQD |
162 |
177 |
| 31886 |
KLGLKLLRYYTEILS |
197 |
212 |
| 36463 |
LIANCASILCKCYTT |
382 |
397 |
| 41738 |
MILAVQGVQDYINNE |
167 |
182 |
| 35842 |
LFGPSLRDPISAEIS |
212 |
227 |
| 32677 |
KPDLTGTSKSYVRSL |
532 |
547 |
| 281 |
AALGVATAAQITAGI |
117 |
132 |
|
|
|
MKILFATLLVVTTPHLVTGQIHWGNLSKIGVVGTGSASYKVMTQSSHQTLVIKLMPNITAIDNCTKTEIEEYKRLLGTVLQPIKVALNAITKNIKPIRSSTTSRRHRRFAGVALAGAALGVATAAQITAGIALHQSMMNTQAIESLKASLETTNQAIEEIRQAGQEMILAVQGVQDYINNELVPAMGQLSCDIVGQKLGLKLLRYYTEILSLFGPSLRDPISAEISIQALSYALGGDINKILEKLGYSGSDLLAILESKGIKAKITYVDIESYFIVLSIAYPSLSEIKGVIIHRLEGVSYNIGSQEWYTTVPRYVATQGYLISNFDDTPCAFSPEGTICSQNALYPMSPLLQECFRGSTRSCARTLVSGSIGNRFILSKGNLIANCASILCKCYTTGSIISQDPDKILTYIAADQCPIVEVDGVTIQVGSREYPDAVYLHKIDLGPPISLEKLDVGTNLGNAVTKLEKAKDLLDSSDLILETIKGASVTNTGHILVGAGLIAVVGILIVTCCCRKRSNDSKVSTVILNPGLKPDLTGTSKSYVRSL
|