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RPVgp6 H

General Information
Protegen ID 3559
Sequence Strain (Species/Organism) Rinderpest virus (strain Kabete O)
Taxonomy ID 11242
Molecule Role Protective antigen
Related Vaccines(s) v2RVFH
References  
Gene Information
Gene Name RPVgp6 H
NCBI Gene ID 3021774
Genbank Accession X98291
Locus Tag RPVgp6
Gene Starting Position 7258
Gene Ending Position 9087
DNA Sequence 
>NC_006296.2:7258-9087 Rinderpest virus (strain Kabete O), complete genome
CATGTCTCCCCCAAGAGACAGGGTCGACGCTTACTACAAGGACAACTTCCAATTCAAGAACACTCGGGTG
GTTCTTAATAAAGAGCAGCTCCTGATAGAGAGACCTTGCATGTTGCTGACGGTGTTGTTTGTCATGTTCC
TGAGTCTAGTCGGGCTATTAGCTATCGCAGGTATCAGACTCCATCGAGCTGCTGTCAATACAGCAAAAAT
CAACAATGACCTGACAACAAGTATTGATATTACCAAATCCATTGAGTACCAGGTCAAGGATGTTTTAACT
CCACTCTTCAAAATAATTGGAGATGAGGTCGGGTTGAGGACGCCTCAGAGATTCACAGATCTGACTAAAT
TCATATCAGACAAGATCAAGTTCCTTAACCCTGATAAGGAGTACGACTTTAGAGATATCAACTGGTGCAT
CAACCCTCCAGAGAGAATTAAGATTGATTATGATCAGTATTGTGCTCACACAGCAGCTGAGGATCTGATA
ACAATGCTTGTCAATTCATCCTTAACAGGGACTACAGTACTCCGCACGTCATTAGTCAACTTGGGGAGGA
ACTGTACTGGACCCACAACCACTAAGGGTCAGTTCTCTAATATATCATTGACCCTTTCCGGGATATACTC
AGGTCGTGGCTACAACATTTCATCTATGATCACTATTACTGGGAAAGGCATGTACGGGAGCACTTATCTG
GTCGGGAAATACAATCAAAGAGCCAGGAGGCCAAGCATAGTATGGCAACAGGATTACCGAGTCTTCGAAG
TAGGCATAATTAGAGAACTAGGAGTGGGCACACCAGTGTTTCATATGACAAACTACCTGGAACTTCCAAG
ACAGCCGGAATTGGAGACTTGCATGCTAGCCCTAGGAGAGTCCAAATTAGCTGCCCTCTGCCTAGCTGAC
AGCCCCGTCGCACTGCACTACGGGAGGGTAGGAGACGACAACAAGATCAGATTTGTCAAATTGGGAGTAT
GGGCATCACCGGCCGACCGAGACACTTTGGCCACTCTTTCAGCAATAGACCCGACATTGGACGGACTCTA
TATCACAACTCATAGGGGGATCATAGCTGCAGGGACTGCCATATGGGCTGTCCCTGTGACGAGAACAGAT
GACCAAGTGAAAATGGGAAAGTGCCGCCTAGAGGCTTGTCGAGACAGACCACCACCTTTCTGTAACAGTA
CAGATTGGGAGCCACTAGAGGCTGGCCGAATACCGGCGTATGGAGTACTAACCATCAAACTAGGGCTGGC
TGATGAGCCTAAAGTTGACATAATTTCAGAATTTGGTCCTCTAATCACCCATGACTCAGGGATGGATTTA
TACACCTCATTTGACGGTACCAAGTACTGGTTGACTACTCCTCCATTGCAGAACTCAGCTCTAGGAACTG
TGAACACCCTAGTTTTAGAGCCCAGTCTCAAAATTAGTCCTAACATCCTTACTCTCCCCATCAGGTCGGG
AGGGGGTGACTGTTATACTCCTACTTACCTGTCAGACCGGGCTGACGATGATGTTAAATTGAGCTCCAAT
CTTGTAATCCTCCCAAGTAGGGACCTCCAATATGTGTCTGCAACCTACGACATCTCCAGAGTTGAACATG
CCATTGTGTACCACATCTATAGTACCGGGCGACTATCATCGTATTACTACCCTTTCAAGTTGCCCATAAA
GGGAGATCCTGTCAGTCTGCAGATCGAATGCTTCCCGTGGGACCGCAAACTGTGGTGCCATCATTTCTGC
TCTGTTATAGATTCAGGGACTGGTGAGCAGGTCACCCATATAGGGGTAGTAGGGATTGAGATCACTTGCA
ATGGGAAATA
Protein Information
Protein Name H protein
NCBI Protein GI 56410435
Protein Accession YP_087125
Protein pI 7.04
Protein Weight 63930.13
Protein Length 609
Protein Sequence 
>YP_087125.2 H protein [Rinderpest virus (strain Kabete O)]
MSPPRDRVDAYYKDNFQFKNTRVVLNKEQLLIERPCMLLTVLFVMFLSLVGLLAIAGIRLHRAAVNTAKI
NNDLTTSIDITKSIEYQVKDVLTPLFKIIGDEVGLRTPQRFTDLTKFISDKIKFLNPDKEYDFRDINWCI
NPPERIKIDYDQYCAHTAAEDLITMLVNSSLTGTTVLRTSLVNLGRNCTGPTTTKGQFSNISLTLSGIYS
GRGYNISSMITITGKGMYGSTYLVGKYNQRARRPSIVWQQDYRVFEVGIIRELGVGTPVFHMTNYLELPR
QPELETCMLALGESKLAALCLADSPVALHYGRVGDDNKIRFVKLGVWASPADRDTLATLSAIDPTLDGLY
ITTHRGIIAAGTAIWAVPVTRTDDQVKMGKCRLEACRDRPPPFCNSTDWEPLEAGRIPAYGVLTIKLGLA
DEPKVDIISEFGPLITHDSGMDLYTSFDGTKYWLTTPPLQNSALGTVNTLVLEPSLKISPNILTLPIRSG
GGDCYTPTYLSDRADDDVKLSSNLVILPSRDLQYVSATYDISRVEHAIVYHIYSTGRLSSYYYPFKLPIK
GDPVSLQIECFPWDRKLWCHHFCSVIDSGTGEQVTHIGVVGIEITCNGK
Vaxign Prediction
Localization(Probability)
(Prob.=0)
Adhesin Probability 0.309
Trans-membrane Helices 1
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope