VIOLIN Logo
VO Banner
Search: for Help
Protegen Home
Introduction
Statistics
News and Updates
Protegen Query
Protegen BLAST
Selected Bacteria
Brucella spp. (26)
B. anthracis (14)
E. coli (40)
M. tuberculosis (26)
N. meningitidis (18)
Selected Viruses
Ebola virus (19)
HIV (41)
Influenza virus (50)
Selected Parasites
Plasmodium (47)
Data Submission
Data Exchange
Data Download
Documentation
FAQs
Disclaimer
Contact Us
UMMS Logo


RPVgp6 H

General Information
Protegen ID 3559
Sequence Strain (Species/Organism) Rinderpest virus (strain Kabete O)
Taxonomy ID 11242
Molecule Role Protective antigen
Related Vaccines(s) v2RVFH
References  
Gene Information
Gene Name RPVgp6 H
NCBI Gene ID 3021774
Genbank Accession X98291
Locus Tag RPVgp6
Gene Starting Position 7258
Gene Ending Position 9087
DNA Sequence 
>NC_006296.2:7258-9087 Rinderpest virus (strain Kabete O), complete genome
CATGTCTCCCCCAAGAGACAGGGTCGACGCTTACTACAAGGACAACTTCCAATTCAAGAACACTCGGGTG
GTTCTTAATAAAGAGCAGCTCCTGATAGAGAGACCTTGCATGTTGCTGACGGTGTTGTTTGTCATGTTCC
TGAGTCTAGTCGGGCTATTAGCTATCGCAGGTATCAGACTCCATCGAGCTGCTGTCAATACAGCAAAAAT
CAACAATGACCTGACAACAAGTATTGATATTACCAAATCCATTGAGTACCAGGTCAAGGATGTTTTAACT
CCACTCTTCAAAATAATTGGAGATGAGGTCGGGTTGAGGACGCCTCAGAGATTCACAGATCTGACTAAAT
TCATATCAGACAAGATCAAGTTCCTTAACCCTGATAAGGAGTACGACTTTAGAGATATCAACTGGTGCAT
CAACCCTCCAGAGAGAATTAAGATTGATTATGATCAGTATTGTGCTCACACAGCAGCTGAGGATCTGATA
ACAATGCTTGTCAATTCATCCTTAACAGGGACTACAGTACTCCGCACGTCATTAGTCAACTTGGGGAGGA
ACTGTACTGGACCCACAACCACTAAGGGTCAGTTCTCTAATATATCATTGACCCTTTCCGGGATATACTC
AGGTCGTGGCTACAACATTTCATCTATGATCACTATTACTGGGAAAGGCATGTACGGGAGCACTTATCTG
GTCGGGAAATACAATCAAAGAGCCAGGAGGCCAAGCATAGTATGGCAACAGGATTACCGAGTCTTCGAAG
TAGGCATAATTAGAGAACTAGGAGTGGGCACACCAGTGTTTCATATGACAAACTACCTGGAACTTCCAAG
ACAGCCGGAATTGGAGACTTGCATGCTAGCCCTAGGAGAGTCCAAATTAGCTGCCCTCTGCCTAGCTGAC
AGCCCCGTCGCACTGCACTACGGGAGGGTAGGAGACGACAACAAGATCAGATTTGTCAAATTGGGAGTAT
GGGCATCACCGGCCGACCGAGACACTTTGGCCACTCTTTCAGCAATAGACCCGACATTGGACGGACTCTA
TATCACAACTCATAGGGGGATCATAGCTGCAGGGACTGCCATATGGGCTGTCCCTGTGACGAGAACAGAT
GACCAAGTGAAAATGGGAAAGTGCCGCCTAGAGGCTTGTCGAGACAGACCACCACCTTTCTGTAACAGTA
CAGATTGGGAGCCACTAGAGGCTGGCCGAATACCGGCGTATGGAGTACTAACCATCAAACTAGGGCTGGC
TGATGAGCCTAAAGTTGACATAATTTCAGAATTTGGTCCTCTAATCACCCATGACTCAGGGATGGATTTA
TACACCTCATTTGACGGTACCAAGTACTGGTTGACTACTCCTCCATTGCAGAACTCAGCTCTAGGAACTG
TGAACACCCTAGTTTTAGAGCCCAGTCTCAAAATTAGTCCTAACATCCTTACTCTCCCCATCAGGTCGGG
AGGGGGTGACTGTTATACTCCTACTTACCTGTCAGACCGGGCTGACGATGATGTTAAATTGAGCTCCAAT
CTTGTAATCCTCCCAAGTAGGGACCTCCAATATGTGTCTGCAACCTACGACATCTCCAGAGTTGAACATG
CCATTGTGTACCACATCTATAGTACCGGGCGACTATCATCGTATTACTACCCTTTCAAGTTGCCCATAAA
GGGAGATCCTGTCAGTCTGCAGATCGAATGCTTCCCGTGGGACCGCAAACTGTGGTGCCATCATTTCTGC
TCTGTTATAGATTCAGGGACTGGTGAGCAGGTCACCCATATAGGGGTAGTAGGGATTGAGATCACTTGCA
ATGGGAAATA
Protein Information
Protein Name H protein
NCBI Protein GI 56410435
Protein Accession YP_087125
Protein pI 7.04
Protein Weight 63930.13
Protein Length 609
Protein Sequence 
>YP_087125.2 H protein [Rinderpest virus (strain Kabete O)]
MSPPRDRVDAYYKDNFQFKNTRVVLNKEQLLIERPCMLLTVLFVMFLSLVGLLAIAGIRLHRAAVNTAKI
NNDLTTSIDITKSIEYQVKDVLTPLFKIIGDEVGLRTPQRFTDLTKFISDKIKFLNPDKEYDFRDINWCI
NPPERIKIDYDQYCAHTAAEDLITMLVNSSLTGTTVLRTSLVNLGRNCTGPTTTKGQFSNISLTLSGIYS
GRGYNISSMITITGKGMYGSTYLVGKYNQRARRPSIVWQQDYRVFEVGIIRELGVGTPVFHMTNYLELPR
QPELETCMLALGESKLAALCLADSPVALHYGRVGDDNKIRFVKLGVWASPADRDTLATLSAIDPTLDGLY
ITTHRGIIAAGTAIWAVPVTRTDDQVKMGKCRLEACRDRPPPFCNSTDWEPLEAGRIPAYGVLTIKLGLA
DEPKVDIISEFGPLITHDSGMDLYTSFDGTKYWLTTPPLQNSALGTVNTLVLEPSLKISPNILTLPIRSG
GGDCYTPTYLSDRADDDVKLSSNLVILPSRDLQYVSATYDISRVEHAIVYHIYSTGRLSSYYYPFKLPIK
GDPVSLQIECFPWDRKLWCHHFCSVIDSGTGEQVTHIGVVGIEITCNGK
Epitope Information
IEDB Linear Epitope