CD1D |
| General Information |
| Protegen ID |
3636 |
|
Sequence Strain (Species/Organism) |
Homo sapiens |
|
Taxonomy ID |
9606
|
|
Molecule Role |
Protective antigen |
| Related Vaccines(s) |
FluMist
|
| References |
|
| Gene Information |
|
Gene Name |
CD1D |
|
NCBI Gene ID |
912
|
|
Genbank Accession |
AF142668 |
|
Chromosome No |
1 |
|
Gene Starting Position |
158178037 |
|
Gene Ending Position |
158186426 |
|
DNA Sequence |
>NC_000001.11:158178037-158186426 Homo sapiens chromosome 1, GRCh38.p12 Primary Assembly
GAGTTTTGCTCCTGGGACTGGACGTCCGAGAGGTAAGAGAGCTATCACAAGGTTTTCTAATCCTTATGTT
TCTTTTAGTGGATCTCCAGGTTACTGTGGTTTGTATTATCAGGCTACTTACAAAAATGAATACCTCTTTA
AATCAGGCCATTTTACAGCAAACTACGGTCCTTGATCACCATTATGCTCTGAATAAAGACTATGAGCAAT
TGCACTTGAATGCTGTTAAACTTTATTGACTGAACTTTGAATTGTTTGATTTTGATCAGGTTGGCTTGTG
GAAAGTGCTATTAAGAAGAGTTCTTTAGTTCGTTGGTATTATCCTCCTGATAGCTATTATAAAAGTTTCC
CTGATGTGTCCTCTCAAGAATCTTAAATTCTCATATGCAGCTATCCTTTGTACATTAAATGGTCTCCTTA
TGGTTAGGATAACAAAAACATGAAGAAAGCATATAAGATTCCAACTAATTTGACGTTGTGAATTGTGAAT
TCTGAACTGAAACCAAGTAAGTCCCTTATGATCAGGCTCCAAGGTTTTGGTCAGCCTCTCAAAATTGAGA
GGCTGAAACCCTTTGACCAAAATTAACACATTTGCCCCTTCCCTCCAGCTCCTGGAAACCACTACCCTAA
CTCTGTTTCCATAAAATAGTAAACTATTTTAGAGTCCACATATAAGTGAGATCATGTAGTACCCACCGTG
GGCTTATTTTAAGGCTCTGAGTAAATCACCATCTCTCTGTGCTAGGGTATTCTGAGTCAGTCTTGTTATA
AAATATTTTGTTTAGGTAACATATTGCAAAACGTTTCATAATTCAATGGTTCCTTTCCCAGAAAAAAAGC
AGTGAAAGTTCCAATAGCCAAAAAGTGTCTAACTCAACTGACCTTTGGGAAAAAATATCCGTATAATTCC
AGATAGTCCTAACTTCTGAAGGTAATATAGCCTGGCCTCTGTTGATAAACAAACAAAAACAAAAAAACCA
CACACACACACACAAACCAGCTTCTTGTCTTTAAGTGTGCAAGAATGTTAGCACTTAAAATTTTTAAGAT
ACACAAAAACTAAACAGAACTGTTCAAGTTTTTAAAGGGAGCTTGGAAATTTGAAGAAAGTAAAGTTAAA
AATATTGCCCCATGAGTCATATAATTATTTTTCTTTTTATTTCTCATAGCTTCCCTCCTATCCATTATTT
AGGCAATTTTGTATCCAAATTTAATAATTTAACACCTTATTTGTTACAAGAACACGTTACTATGTTATTT
TAAGCTTTTTTGGGCAAATTACACATAATTAGATAGGCTGGGTTAGGGCTGTCTACAAGATCCCAGCCTA
GAGTGTGGTGCAGTAGCCTATTTTCTCTAGGACTCTTGCTGCAACAGGATATGGGAGAAGGGAAACATTA
ACGTTAGCAGAATGGGAGGAATCAGATTATGGAGACATGATCCTTGCCTTCTGGCACCTCTCCAGCTGAT
TTAGAAGAGGACACAGAGGGAGACAGACATATGGCCATTTCTATAATTATAAACTCTGCTACATGCTGAG
AGGATGGCTTCTCAAAGCCAGTTAGTGTACAAGCAGTGGAGGTTGGGACTGCCCTACTTCTCCTGCCTAG
GGTCACACAGTCTGGCAGATCTGGAAAGACTTCCCTGAGAAAGTGACCTTGGAACTGATACCTTAGTGGA
AATAACTAGGCATTGGGAGGGGGTGAGGTGAGGAGAAGGTCAAGAGCTTTCATGTAGAGGGAACTTTGTG
CAGAGACCTTAGTCAGGAAGAGGTTTTGCATAGTGGAGGAACTGAAAGCTAACAGCCAGGCTACAGTACA
GAGCAAATGATGCTGGGGTGTGAGGTGATGTCAAAAGGTAGACACCAGGGCTAGAGGGCGCATAATCTTG
CAGGCCGTGCTAATGATTTTGTTTTCTACCCAAGAATGCTACTTCAGGAGATCAGTCAAAAGGTTAGGGT
GATGGTGACGGTGGAAATATAGAAAAAGGAATTTATTCAAGAGGTATTCAAAAAGAAGTGAAATAGAGAT
GAGTTGGAGATAGATTGGATAAAAAGAGTGAGGGAGAGGGAGGTGTCAGGCTGCAGCCCAGGTTCTGAGT
TGCCAAAGAGGAGTCTTTTCCTCCAGGTGAGCTAAGGCTTAGAACCACGATTTTTGGTCACTTTTTCTTA
TTTTCAGTGTGAGAAGTGGCGAGTTGGCTGTCCAGGTACACACTGTCATCTTACACTTACTGTTTAAGAC
AGAGGCGCATATTTGGAAAGTGAATGAGTCAGGAGCCAGAGGAGAAGGTATGCCGGCAGAGCCTAGGGCG
GAGAGGAGGAAGAGAGTCTGGGGGCGCGTCCCCAAAAAGGAGACAGGGAAGACAGAGCAGAGGCCGGGGA
GGGGAGAGCAAGGACCATGACAGGAGGAAAGAGAGGCTAGGGAACACTGAGGTGGAGGAATCCTGGGATA
TGACAGTTGTAAAGAATTGTAGCCAACCTAATCCAGTTCTCTCAATGTGCAACTGAGGAAATTAATTTTC
ATGCGTTTACTTTATTGTAAATGTGGTACTTGCACTTGAGAAATTTTGGAAAACATAAAGATGTAAAGCA
AATTAAGATCACTCATAGTCTTTCCACCTAGAGACATGTACTGCTAAAGCAAGGACTTTGATCCTTTTTT
CCCTTTGCATTTTTACCATGGTTGGAATTGTAACACAGACACAACCTTATGTCCTGCTTCCAAAACATAA
ATAATGGTTGTAAAGCGTCCCACACGTTGACCCAAAGTCTCCTTTGAAACAGGAAATTGAGACACGCCGG
TTGTGAAACCTACTGAAGTGAGCGGCGGCGCCAGGATTCCTGGGACCCCGACCTCTTTGCAGCTCGCACA
GCTAAGGGCGAGGGCGCCCTTCGGCAGAAGCAGCAAACCGCCGGCAAGCCCAGCGAGGAGGGCTGCCGGG
GTCTGGGCTTGGGAATTGGCTGGCACCCAGCGGAAAGGGACGTGAGCTGAGCGGCGGGGGAGAAGAGTGC
GCAGGTCAGAGGGCGGCGCGCAGCGGCGCTCCGCGAGGTCCCCACGCCGGGCGATATGGGGTGCCTGCTG
TTTCTGCTGCTCTGGGCGCTCCTCCAGGCTTGGGGAAGCGCTGAAGGTGGGTGGAACGAGGGCGCTTGAG
TGCACTCGCGGGAGGGCGGAGAGAGGGAGCTGGGTAGGGACGGGGAGGGCAACGCCTGATGGGGACTGGT
GAGACCCGGGACGCACTGGCGCGATCTAGGTAGAAAACTCGCTGCTCCCTGGCTCCGGGGAGAGGCAGCG
CGGCACAGAGTTCGCTGGCATCAGCCGCCTCCTGAAGCTCATCTCCTCTTGTTTCTTTCTTCCTTCTCTT
TATGCTGGCTGCTCTCCCGGCCACTTGCTACACGCCTCCAATCTTCATTCTCTCCCAGTCCCGCAAAGGC
TTTTCCCCCTCCGCTGCCTCCAGATCTCGTCCTTCGCCAATAGCAGCTGGACGCGCACCGACGGCTTGGC
GTGGCTGGGGGAGCTGCAGACGCACAGCTGGAGCAACGACTCGGACACCGTCCGCTCTCTGAAGCCTTGG
TCCCAGGGCACGTTCAGCGACCAGCAGTGGGAGACGCTGCAGCATATATTTCGGGTTTATCGAAGCAGCT
TCACCAGGGACGTGAAGGAATTCGCCAAAATGCTACGCTTATCCTGTGAGCTGAGGGATAGGATCCTGGG
CCGGTACCCAAGGGGAGAGAATGGCCACAGAAACTCAACTGGGAGACTGTGGCACCACCTGATGAGATTC
TCTGCTCTGTCCACCCTCTTCTGATTTCCCTTCTACCTGGAGATGTCCCAGGCTTTGACTCCTCAAAGTG
TCCCTCGTTCCTGCCTACTCCAGGTCACTTACTTTCCTTTCCCTGAAGTCTGGGTCCCCATTATAACCTG
CACATCAATTTCTTCTCTTTCATCTCTCCCAGTCTTTTAAACCCTTCTTTGATCTTTCTCCATTCCTCTC
CACAGATCCCTTGGAGCTCCAGGTGTCCGCTGGCTGTGAGGTGCACCCTGGGAACGCCTCAAATAACTTC
TTCCATGTAGCATTTCAAGGAAAAGATATCCTGAGTTTCCAAGGAACTTCTTGGGAGCCAACCCAAGAGG
CCCCACTTTGGGTAAACTTGGCCATTCAAGTGCTCAACCAGGACAAGTGGACGAGGGAAACAGTGCAGTG
GCTCCTTAATGGCACCTGCCCCCAATTTGTCAGTGGCCTCCTTGAGTCAGGGAAGTCGGAACTGAAGAAG
CAAGGTCAGCCTGCCTTCCTTACTCCCTGCATTCCACTTCAGGGCTCCAAACGGGCTTTTCCATTCCAGG
GTTCTCATCCCTTTGAGCATTCAAAGAAGAGGAAGGCCCAGGAGGGGCTGGATAAGGGGTGAGGGTATTT
ATTCATTTCACAGACATCAACTGAGCACCTCTTGGGTTCTATGAATTCAATTAATGAACAACTGGGGGTG
AAAGGTGTCAGGCAGTTAGTTAGGATCCCTGCTTGGTAGGGGGATGTTAATTAATGCAATGCTTGAAATA
GGCTACATATGTTACTTCAAAACAAAGGGTGTTATAGGGGAACAGACAAGGGGCATTCATAGGAGGCTGG
GACCAGAGAAGAAGAAGGAGTATCAGGGCAGGCTCCCTGAAGAAGGTGGGACAAATGGATTGAAAGTTGT
GGGAGACTTCATTTCCAGAAGTGAACATGTCAGGGGCATACAGGAAGGAGGGAAATAAAGACCTGAAAGT
CAAAAAGGATGATATGAGGCCTGGAGCCTCTAATGCAGAGTTTTCACTTTAAGATCCCCCCCATTCCCTT
GTTGGATACAGTGAAGCCCAAGGCCTGGCTGTCCCGTGGCCCCAGTCCTGGCCCTGGCCGTCTGCTGCTG
GTGTGCCATGTCTCAGGATTCTACCCAAAGCCTGTATGGGTGAAGTGGATGCGGGGTGAGCAGGAGCAGC
AGGGCACTCAGCCAGGGGACATCCTGCCCAATGCTGACGAGACATGGTATCTCCGAGCAACCCTGGATGT
GGTGGCTGGGGAGGCAGCTGGCCTGTCCTGTCGGGTGAAGCACAGCAGTCTAGAGGGCCAGGACATCGTC
CTCTACTGGGGTGAGAAAAAGCTGGGCCCAAGCTGGAAATGGCAGGAGGTGGTCCTCAGGCATAGAGGGA
GGCACTGGGGTGGGATGTGGCTTGATATACCCAGGTTAGAGGAGTTTCAGAGATGAGGCCCCCAGTAAAA
GGATAGAGAGAGGGGTTCCAGACACAGGAAGGAGGGAAATAAAGACCTGAAAGTCTAAAAGGATTGAAAT
AGTGCTCTCTATATACAAGAAGAAACAAGACTACAAAACTCAGGGATCCAGAAGTAGGCAGCGAATAAAC
AATCCCAGGACGATTCATTCCTTGGCTTAAAGGGAGCCAGGCCTTTGGGAAGGCAGGTTAGCAAAGATAG
CTTGGTTGGTTGAGTGCTCCCTGTGTAGGGGCCAATGAATCTGCATATAATATCTCATCTCATCATTCAC
AGTTTTCTTTGAAGCAAGTACTGCTCTTTTCGTTATATAGATGAGGAAATGAAGGCGGAGATAGGTTAAC
TGCCCGGAGCCACATAGAAAGTGGACGGGCTGGATTTAGATTCAGGTCTGCCTTGCTACAAAGCTGTTGC
CCTTTCCCTCTATGCTACACTAGCAAATGTCAAAGTGGGCTGAATTTGGGATGCCCAGGCACTGAAAACA
AGATGGGGAATCTAAACTTATGAGGAATAGAAATTGGGGTTTTAAGTGGAGGAGGAAATAAGAAGCACCT
GGTACCCTCACACATGCCTAGACCAGGGGATTGGATATATGTAGAGAGGGGTCCTGTGCTGAGAGACAGC
CTATGTTCCTCCAGAGCAGGTGGGAGCTACACCTCCATGGGCTTGATTGCCTTGGCAGTCCTGGCGTGCT
TGCTGTTCCTCCTCATTGTGGGCTTTACCTCCCGGTTTAAGAGGCAAACGTAAGTCTCCCCTTTCCCTTT
CCTCAACCTCTCTCCCCTTCATTCCTGGCTTCCCTTTTCCTTAATGGTCTTTCCCTTTCTATTCTCTCAC
AGTTCCTATCAGGGCGTCCTGTGACTCGCCTTGCCACATCTGTGTCTCTGGAACCCAGGACCTCTGGACC
TCAGGTTCCTAAGACTTCAGTCCTGGTCTGCTCAGGAATTGAAGATGTAAGGAATTGAAGATAGGAGAGA
TACCTTGAAAAAGTAGAGAACAGTCATGAGGCAGCTTTCATCACACCCTTTTAACATTTATCTAAAAGAA
TTTAAATTCTTTTTCAAAAATTACACTACAAGTTTATAAGCCCAAATGGCTCTGTGAAATCAGAAGTGCA
AAGGTGTGCAAACTTGTATCTGAAGACCTACCAGGGACAAGCAGGTAAGAGCTGATGTGAGTGTGTGTGA
TGGGATCTGTAAGGAACTGGAACACACATGTCCTATCCAAAGGAATCAGCTGCAGCTGCTTGTTGTCAAG
TATAAAGTCAGGACCTGGCTTGGCTTTAACCGTTTTTCAAGAAAACTGGAAATCTGGATTTTCAGCGAAC
ATGCCTGATTTTAAAAGGTTGACTCAAGTTTTTACAAAATACTATGTGGGACACCTCAAATACATACCTA
CTGACTGATGACAAACCCAGGAGTTTGTGTGTCTTTTATAAAAAGTTTGCCCTGGATGTCATATTGGCAG
TTGGAGGACACAGTTTCTATTGTAAATTTGGATTTACGACTGAAGAAGGACATTTTCTCTTTAAAAGAAA
GTTAGGTTATAAGAAACAGAGGCGTCTCACATTTTTACTTGGTGTAATTAATAAACGAAGATAAATCATA
GTGTATGTGTATTATGTTGAAAAAAACTACTCTGAGTAAGGATATTTCTCTCAAATGGTCATCACTTTTT
TTCCTTGGAGGAAGATTGTCATGAAGGCATCCCTTCCTTCCCAAAACGACAACGGCAACAACAACAGTCT
CCTTTACTTACAGCTATTAAAAGAGACAATGTAGGGAAAGGGCCAACACCACTTGGGCAAGCATGAGCTG
CAGCGATGATGGTGATGGTAGCCCAGCCATGCTGTGTTCTTATCTTAGAGAGGACAGAGCAGGAAACTTA
CAGGGGTAGCAGACCTTTCTGATGCCAAAGAAATAAGGAGGCCAAAATCATGTTTGCCTAGCTGGGAGGT
AAATCTCTTGGCAGTCAGGGTCCCTGAACACCCAGAAAAAATAAGTGAGACTTAACGGTTGGAGAGTGTT
TGCTTGAGAAAAGTAACATTTCACACTCTCTATACTAGACTTGCACATATGAATTTAGGATGTGCGTGAA
GATTCTGCTAGCTTCAACATATCCCAAAGCACTTGGATATGCCTATAATCCAAGTGCTTTGGGAGGCTGA
GATAGGAGGATTGTTTAAGGCCAGGCATTTGAAATCAGCCTGGGCAACATAGTGAGACCCTGTCTCTACA
AAAAATTAAAAAACTAGCCACCCATGGTGGTGAGCGCCTGTAGTCCTAGCTACTCTGGAGGCTGAGGTGG
GAGGATCCCTTGAGCCCATGAATTCCAGGTTAGTGTGAGCTGTGATTGTGTCACTACAGTGTAAGGATGA
CAGAGGGAGACCCTGTCTTAAAAAAAAATTATGCTAGCTTTTAAATCAATGGTTCCCAAATTGTAGTAAC
CTGACCAACAGCCTCAGCAGGACCTGGGAACTTGTTATAAATGCAAATTGTTTTGGGCCTCATCCTATAC
CCGCTGAATGAGAAACTCTGAGTCTGGAAGCAGGCTCAATAGTCAAGCCCCCTGGTGATTCTGATGCTTA
GCTAAAGTTAGAGAACCACTGTTCTTAGACATTGTGCAATGTTATACAACAACTTCCTCAAAGTGCTAAG
TGAAAAGGACATTGGCCTGGCGTTAGTCAGGGAAGGCGTCCTGGAGGGAGGGGAATTTGAAGCAGAGCTT
TGAAAAACAAAGGCAGTGAGGTGAACCAGCAAGTGCACTGGCTGAGGGGACTGGAGTTCTAGCCTCTGAA
CCAGTTTCCTCCTGTGCCAAAGGAGGATAATAATTATCTATTATTGATTATCTCCTAGACTTGTGGAGTT
CAAGTGTGTAATGCCTTAAAAGATGTGGAGGCTGTTGCTGTGTTTGGTACCACATTGCCCACCCTCACGT
GGCGCTCTTCAGCTTAGGTTCCTCTAGCAGTGTCAAGTTTGTGAACCAACCCCACTGGCCTTCTGCATTC
TGAGGGCACGTGTGTTAAAGTCTCTACTGATGTCCTTTTGGAAATGCCTCTGCATGAATTTATGGTAGCT
CTGACTCATCTTTAAACAATTTTAATTTATTTAGAAAATAAAGGCTTATCTCTCCAGGAA
|
| Protein Information |
|
Protein Name |
transcript variant X1 |
|
NCBI Protein GI |
982742445
|
|
Protein Accession |
NP_001306074 |
|
Protein pI |
8.22 |
|
Protein Weight |
26015.73 |
|
Protein Length |
242 |
|
Protein Note |
Also known as R3; CD1A; R3G1 |
|
Protein Sequence |
>NP_001306074.1 antigen-presenting glycoprotein CD1d isoform 2 precursor [Homo sapiens]
MGCLLFLLLWALLQAWGSAEVPQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKP
WSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKD
ILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQGGSYTSMG
LIALAVLACLLFLLIVGFTSRFKRQTSYQGVL
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
MHC restriction |
Starting position |
Ending position |
| IEDB ID |
Epitope |
Starting position |
Ending position |
|
|
|
MGCLLFLLLWALLQAWGSAEVPQRLFPLRCLQISSFANSSWTRTDGLAWLGELQTHSWSNDSDTVRSLKPWSQGTFSDQQWETLQHIFRVYRSSFTRDVKEFAKMLRLSYPLELQVSAGCEVHPGNASNNFFHVAFQGKDILSFQGTSWEPTQEAPLWVNLAIQVLNQDKWTRETVQWLLNGTCPQFVSGLLESGKSELKKQGGSYTSMGLIALAVLACLLFLLIVGFTSRFKRQTSYQGVL
|
