OmpA |
| General Information |
| Protegen ID |
3861 |
|
Sequence Strain (Species/Organism) |
Shigella spp. |
|
Taxonomy ID |
1282358
|
|
Other Database IDs |
CDD:236764 CDD:143586 |
|
Molecule Role |
Protective antigen |
|
Molecule Role Annotation |
(Pore and Chakrabarti, 2013) |
| References |
Pore and Chakrabarti, 2013: Pore D, Chakrabarti MK. Outer membrane protein A (OmpA) from Shigella flexneri 2a: a promising subunit vaccine candidate. Vaccine. 2013; 31(36); 3644-3650. [PubMed: 23764536].
|
| Gene Information |
|
Gene Name |
OmpA |
| Protein Information |
|
Protein Name |
OmpA |
|
NCBI Protein GI |
AIL39878
|
|
Protein pI |
5.42 |
|
Protein Weight |
36428.71 |
|
Protein Length |
411 |
|
Protein Note |
outer membrane protein A; Reviewed |
|
Protein Sequence |
>AIL39878.1 OmpA [Shigella flexneri Shi06HN006]
MDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFG
GYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVP
GGASFKDHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRFGQGEAAP
VVAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYN
QGLSERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDV
VTQPQA
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
MHC restriction |
Starting position |
Ending position |
| IEDB ID |
Epitope |
Starting position |
Ending position |
| 99569 |
QGLSERRA |
281 |
289 |
| 99788 |
YNQGLSER |
279 |
287 |
| 99288 |
GLSERRAQ |
282 |
290 |
| 99126 |
CLAPDRRV |
333 |
341 |
| 99661 |
SERRAQSV |
284 |
292 |
| 99510 |
NQGLSERR |
280 |
288 |
| 99419 |
LGYTDRIG |
268 |
276 |
| 99763 |
VLGYTDRI |
267 |
275 |
| 99456 |
LSERRAQS |
283 |
291 |
| 99228 |
ERRAQSVV |
285 |
293 |
| 99637 |
RRAQSVVD |
286 |
294 |
| 99643 |
RRVEIEVK |
338 |
346 |
| 99410 |
LAPDRRVE |
334 |
342 |
| 99110 |
APDRRVEI |
335 |
343 |
| 99774 |
VVLGYTDR |
266 |
274 |
| 936189 |
EYQWTNN |
173 |
180 |
|
|
|
MDDNEAQKMKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFIPNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGDNINGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKANVPGGASFKDHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDANTIGTRPDNGLLSLGVSYRFGQGEAAPVVAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA
|