sca1
General Information
Protegen ID
3876
Sequence Strain (Species/Organism)
Rickettsia typhi str
Taxonomy ID
257363
Other Database IDs
ATCC:VR-144
Molecule Role
Protective antigen
Molecule Role Annotation
(Sears et al. , 2012 )
References
Sears et al. , 2012: Sears KT, Ceraul SM, Gillespie JJ, Allen ED Jr, Popov VL, Ammerman NC, Rahman MS, Azad AF. Surface proteome analysis and characterization of surface cell antigen (Sca) or autotransporter family of Rickettsia typhi. PLoS pathogens . 2012; 8(8); e1002856. [PubMed: 22912578 ].
Gene Information
Gene Name
sca1
Protein Information
Protein Name
Sca1
NCBI Protein GI
ABC41089
Protein pI
10.33
Protein Weight
17662.38
Protein Length
227
Protein Note
type strain of Rickettsia typhi
Protein Sequence
>ABC41089.1 Sca1, partial [Rickettsia typhi str. Wilmington]
AMYGTNNHGRVNNMTGYRGINKGATVGFDAKINNNIIGIAYSNVHSVFKFKNSKNNDKELIGSKVISIYG
QKELQQNFTLQVLVSASKNFIKDKINYSYGDTKIRSNVKHHNHSYNAEALLNYNYLVKNSIIVTPNIGLR
YGKSRDGIYNETGINVQKIALT
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
MHC restriction
Starting position
Ending position
IEDB ID
Epitope
Starting position
Ending position
AMYGTNNHGRVNNMTGYRGINKGATVGFDAKINNNIIGIAYSNVHSVFKFKNSKNNDKELIGSKVISIYGQKELQQNFTLQVLVSASKNFIKDKINYSYGDTKIRSNVKHHNHSYNAEALLNYNYLVKNSIIVTPNIGLRYGKSRDGIYNETGINVQKIALT
