hcp1
General Information
Protegen ID
3889
Sequence Strain (Species/Organism)
Pseudomonas aeruginosa
Taxonomy ID
287
Other Database IDs
CDD:310322
Molecule Role
Protective antigen
Molecule Role Annotation
(Yang et al. , 2017 )
References
Yang et al. , 2017: Yang F, Gu J, Yang L, Gao C, Jing H, Wang Y, Zeng H, Zou Q, Lv F, Zhang J. Protective Efficacy of the Trivalent Pseudomonas aeruginosa Vaccine Candidate PcrV-OprI-Hcp1 in Murine Pneumonia and Burn Models. Scientific reports . 2017; 7(1); 3957. [PubMed: 28638106 ].
Gene Information
Gene Name
hcp1
Protein Information
Protein Name
Hcp1
NCBI Protein GI
ARG84223
Protein pI
7.66
Protein Weight
16544.36
Protein Length
208
Protein Note
Type VI secretion system effector, Hcp; pfam05638
Protein Sequence
>ARG84223.1 Hcp1 [Pseudomonas aeruginosa]
MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTKYIDKSTPNLM
MACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQK
ADGAKDGGPVKYGWNIRQNVQA
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
MHC restriction
Starting position
Ending position
IEDB ID
Epitope
Starting position
Ending position
MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
