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ompF

General Information
Protegen ID 3969
Sequence Strain (Species/Organism) Escherichia coli
Taxonomy ID 562
Other Database IDs CDD:236639
CDD:238208
Molecule Role Protective antigen
Molecule Role Annotation (Wang et al., 2017)
References
Wang et al., 2017: Wang X, Teng D, Guan Q, Mao R, Hao Y, Wang X, Yao J, Wang J. Escherichia coli outer membrane protein F (OmpF): an immunogenic protein induces cross-reactive antibodies against Escherichia coli and Shigella. AMB Express. 2017; 7(1); 155. [PubMed: 28728309].
Gene Information
Gene Name ompF
Protein Information
Protein Name OmpF
NCBI Protein GI APB87310
Protein pI 4.49
Protein Weight 37197.72
Protein Length 405
Protein Note outer membrane protein F; Provisional
Protein Sequence 
>APB87310.1 OmpF [Escherichia coli]
MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGE
TQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEF
GGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIV
GAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVL
LVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGS
DDTVAVGIVYQF
Vaxign Prediction
Localization(Probability) Outer Membrane
(Prob.=1)
Adhesin Probability 0.635
Trans-membrane Helices 0
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope