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fedF

General Information
Protegen ID 3975
Sequence Strain (Species/Organism) Escherichia coli
Taxonomy ID 562
Other Database IDs UniProtKB/TrEMBL: Q47212
Molecule Role Protective antigen
Molecule Role Annotation The immunized mice showed significant protection efficacy against a lethal dose 50 of a virulent strain, resulting in approximately 85% and 92% survival rates in mice with a single- and double-dose immunization, respectively, compared to only 40% of the non-immunized controls (Won and John, 2017).
References
Won and John, 2017: Won G, John Hwa L. Potent immune responses induced by a Salmonella ghost delivery system that expresses the recombinant Stx2eB, FedF, and FedA proteins of the Escherichia coli-producing F18 and Shiga toxin in a murine model and evaluation of its protective effect as a porcine vaccine candidate. The Veterinary quarterly. 2017; 37(1); 81-90. [PubMed: 28317440].
Gene Information
Gene Name fedF
Protein Information
Protein Name FedF
NCBI Protein GI CAA81288
Protein pI 9.25
Protein Weight 31357.97
Protein Length 342
Protein Note gene is part of the F107 fimbrial gene cluster
Protein Sequence
>CAA81288.1 FedF [Escherichia coli]
MRLKYILIIPLLLISLSVFASTLQVDKSVSYDWINSSASSAQVTGTLLGTGKTNTTQMPALYTWQHQIYN
VNFIPSSSGTLTCQAGTILVWKNGRETQYALECRVSIHHSSGSINESQWGQQSQVGFGTACGNKKCRFTG
FEISLRIPPNAQTYPLSSGDLKGSFSLTNKEVNWSASIYVPAIAKSYRLDTSITLPDTVNLKQNQATPVY
YTFSAPSVSNTITGIPNQNDMPSSNVKLTIGPIQSKTTALYVQPDATGSWYDLSKSITMTVVKSSMLNFK
GINAKPGNVTLSVPIVFEIQ
Vaxign Prediction
Localization(Probability) Extracellular
(Prob.=0.965)
Adhesin Probability 0.842
Trans-membrane Helices 0
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope