VIOLIN: Vaccine Investigation and Online Information Network

S1

General Information

Protegen ID

4239

Sequence Strain (Species/Organism)

Infectious Bronchitis Virus (IBV)

Taxonomy ID

11120

Other Database IDs

CDD:279880

Molecule Role

Protective antigen

Molecule Role Annotation

(Zhang et al., 2014)

References

Zhang et al., 2014: Zhang J, Chen XW, Tong TZ, Ye Y, Liao M, Fan HY. BacMam virus-based surface display of the infectious bronchitis virus (IBV) S1 glycoprotein confers strong protection against virulent IBV challenge in chickens. Vaccine. 2014; 32(6); 664-670. [PubMed: 24342247].

Gene Information

Gene Name

Protein Information

Protein Name

S1 glycoprotein

NCBI Protein GI

AAQ63417

Protein pI

8.35

Protein Weight

55548.912

Protein Length

621

Protein Note

Coronavirus S1 glycoprotein; pfam01600

Protein Sequence

>AAQ63417.1 S1 glycoprotein, partial [Infectious bronchitis virus]
MLVKSLFLVTLLFALCSATLYDNDTYVYYYQSAFRPPVGWHLHGGAYAVVNVSQETNNAGSASQCTAGAI
HWSKNFSAASVAMTTPPSGMDWSTSQFCTAHCNFSNIVVFVTHCYKSGNNACPLTGLINQGYIRISAMKQ
GGSGPADLFYNLTVPVTKYSKFRSLQCVNNQTSVYLNGDLVFTSNETTDVVGAGVSFKAGGPITYKVMRE
VKALAYFINGTAQDVILCDRSPRGLLACQYNTGNFSDGFYPFTNSSLVKEKFIVYRENSVNTTLVLHNFT
FHNETSAPPNTVGGVDSIKVYQTQIAQSGYYNFNFSFLSGFVYKESDFMYGSYHKSCNFRPESINNGLWF
NSLTVSLAYGPLQGGCKQSVFNGKATCCYAYSYNGPRACKGVYRGELQTSFECGLLVFITKSDGSRIQTA
AQVPVITTNFYNNITLNKCVDYNIYGRVGQGFITNVTDSAATYNYLAVGGLAILDTSGAIDIFVVQGAYG
PNFYKVNPCDDVNQQFVVSGGNIVGILTSRNEXGSQLLENQFFIKLTNGTRRFKR

Epitope Information

IEDB Linear Epitope