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ORF1a

General Information
Protegen ID 4296
Sequence Strain (Species/Organism) Porcine respiratory and reproductive syndrome virus
Taxonomy ID 28344
Molecule Role Protective antigen
Molecule Role Annotation (Mokhtar et al., 2017)
References
Mokhtar et al., 2017: Mokhtar H, Biffar L, Somavarapu S, Frossard JP, McGowan S, Pedrera M, Strong R, Edwards JC, Garcia-Durán M, Rodriguez MJ, Stewart GR, Steinbach F, Graham SP. Evaluation of hydrophobic chitosan-based particulate formulations of porcine reproductive and respiratory syndrome virus vaccine candidate T cell antigens. Veterinary microbiology. 2017; 209; 66-74. [PubMed: 28228336].
Gene Information
Gene Name ORF1a
Protein Information
Protein Name NSP5
NCBI Protein GI AMN09501
Protein pI 9.34
Protein Weight 17909.84
Protein Length 254
Protein Note genotype: 1 (European)
Protein Sequence 
>AMN09501.1 NSP5, partial [Porcine reproductive and respiratory syndrome virus]
GGLSTVQLLCVFFLLWRMMGHAWTPIVAVGFFLLNEILPAVLVRAVFSFALFVLAWATPWSAQVLMIRLL
TASLNRNKLSLAFYALGGVVGLAAEIGTFAGRLSELSQALSTYCFLPRVLAMTSCVPTIIIGGLHTLGVI
LWLFKYRCLHNMLVGDGSFSSAFFLRYFAE
Epitope Information
IEDB Linear Epitope