VP1
General Information
Protegen ID
4310
Sequence Strain (Species/Organism)
Porcine parvovirus
Taxonomy ID
10796
Other Database IDs
CDD:285583
Molecule Role
Protective antigen
Molecule Role Annotation
(Xie et al. , 2010 )
References
Xie et al. , 2010: Xie HL, Wang Z, Cui SJ, Zhang CF, Cui YD. The epitope of the VP1 protein of porcine parvovirus. Virology journal . 2010; 7; 161. [PubMed: 20637107 ].
Gene Information
Gene Name
VP1
Protein Information
Protein Name
VP1 protein
NCBI Protein GI
AFR43265
Protein pI
8.35
Protein Weight
79417.77
Protein Length
786
Protein Note
Parvovirus coat protein VP1; pfam08398
Protein Sequence
>AFR43265.1 VP1 protein [Porcine parvovirus]
MAPPAKRARGLTLPGYKYLGPGNSLDQGEPTNPSDAAAKEHDEAYDKYIKSGKNPYFYFSAADEKFIKET
EHAKDYGGKIGHYFFRAKRAFAPKLSETDSPTTSQQPEVRRSPRKHPGSKPPGKRPAPRHIFINLAKKKA
KGTSNTNSNSMSENVEQHNPINAGTELSATGNESGGGGGGGGGRGAGGVGVSTGTFNNQTEFQYLGEGLV
RITAHASRLIHLNMPEHETYKRIHVLNSESGVAGQMVQDDAHTQMVTPWSLIDANAWGVWFNPADWQLIS
NNMTEINLVSFEQEIFNVVLKTITESATSPPTKIYNNDLTASLMVALDTNNTLPYTPAAPRSETLGFYPW
LPTKPTQYRYYLSCIRNLNPPTYTGQSQQITDSIQTGLHSDIMFYTIENAVPIHLLRTGDEFSTGIYHFD
TKPLKLTHSWQTNRSLGLPPKLLTEPTTEGDQHSGTLPAANTRKGYHQTINNSYTEATAIRPAQVGYNTP
YMNFEYSNGGPFLTPIVPTADTQYNDDEPNGAIRFTMDYQHGHLTTSSQELERYTFNPQSKCGRAPKQQF
NQQAPLNLENTNNGTLLPSDPIGGKSNMHFMNTLNTYGPLTALNNTAPVFPNGQIWDKELDTDLKPRLHV
TAPFVCKNNPPGQLFVKIAPNLTDDFNADSPQQPRIITYSNFWWKGTLTFTAKMRSSNMWNPIQQHTTTA
ENIGNYIPTNIGGIRMFPEYSQLIPRKLY
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
MHC restriction
Starting position
Ending position
IEDB ID
Epitope
Starting position
Ending position
103809 APPAKRARGLTLPGYKY
2
19
104298 TEATAIRPAQVGYNT
475
490
103972 HNPINAGTELSATGN
158
173
104175 PINAGTELSATGNESG
160
176
103886 EQHNPINAGTELSAT
156
171
104205 QHNPINAGTELSATG
157
172
104132 MSENVEQHNPINAGT
151
166
104327 VEQHNPINAGTELSAT
155
171
104231 SAADEKFIKETEHAKDYG
60
78
104216 RAFAPKLSETDSPT
89
103
104152 NMHFMNTLNTYGPLTAL
587
604
103940 GLTLPGYKYLGPGNSLD
10
27
103965 GYKYLGPGNSLDQGEPT
15
32
103792 AGTELSATGNESGGG
163
178
103942 GNESGGGGGGGGG
171
184
103853 DLTASLMVALDTNNT
318
333
104036 LHSDIMFYTIENAVPIHLL
388
407
104369 YTIENAVPIHLLRTGDEFS
395
414
104319 TTSSQELERYTFNPQ
535
550
104299 TELSATGNESGGGGGGGGGRGAGGV
165
190
104367 YSNGGPFLTPIVPTAD
496
512
104202 QHGHLTTSSQELERYTFNP
530
549
104213 QQFNQQAPLNLENTNNGTL
558
577
104161 NVVLKTITESATSPPT
297
313
103947 GQSQQITDSIQTGLH
375
390
106265 ARGLT
8
13
104051 LPSDPIGGKSNMHFMNTL
577
595
104295 TAIRPAQVGYNTPYMNF
478
495
461874 RSLGLPPK
434
442
461776 FEYSNGGPFLTPI
494
507
MAPPAKRARGLTLPGYKYLGPGNSLDQGEPTNPSDAAAKEHDEAYDKYIKSGKNPYFYFSAADEKFIKETEHAKDYGGKIGHYFFRAKRAFAPKLSETDSPTTSQQPEVRRSPRKHPGSKPPGKRPAPRHIFINLAKKKAKGTSNTNSNSMSENVEQHNPINAGTELSATGNESGGGGGGGGGRGAGGVGVSTGTFNNQTEFQYLGEGLVRITAHASRLIHLNMPEHETYKRIHVLNSESGVAGQMVQDDAHTQMVTPWSLIDANAWGVWFNPADWQLISNNMTEINLVSFEQEIFNVVLKTITESATSPPTKIYNNDLTASLMVALDTNNTLPYTPAAPRSETLGFYPWLPTKPTQYRYYLSCIRNLNPPTYTGQSQQITDSIQTGLHSDIMFYTIENAVPIHLLRTGDEFSTGIYHFDTKPLKLTHSWQTNRSLGLPPKLLTEPTTEGDQHSGTLPAANTRKGYHQTINNSYTEATAIRPAQVGYNTPYMNFEYSNGGPFLTPIVPTADTQYNDDEPNGAIRFTMDYQHGHLTTSSQELERYTFNPQSKCGRAPKQQFNQQAPLNLENTNNGTLLPSDPIGGKSNMHFMNTLNTYGPLTALNNTAPVFPNGQIWDKELDTDLKPRLHVTAPFVCKNNPPGQLFVKIAPNLTDDFNADSPQQPRIITYSNFWWKGTLTFTAKMRSSNMWNPIQQHTTTAENIGNYIPTNIGGIRMFPEYSQLIPRKLY
