VIOLIN: Vaccine Investigation and Online Information Network

glycoprotein

General Information

Protegen ID

4324

Sequence Strain (Species/Organism)

Viral haemorrhagic septicaemia virus

Taxonomy ID

11287

Other Database IDs

CDD:279337
GOA:O42008
InterPro: IPR001903
InterPro: IPR002417
UniProtKB/TrEMBL: O42008

Molecule Role

Protective antigen

Molecule Role Annotation

(Standish et al., 2016)

References

Standish et al., 2016: Standish IF, Millard EV, Brenden TO, Faisal M. A DNA vaccine encoding the viral hemorrhagic septicemia virus genotype IVb glycoprotein confers protection in muskellunge (Esox masquinongy), rainbow trout (Oncorhynchus mykiss), brown trout (Salmo trutta), and lake trout (Salvelinus namaycush). Virology journal. 2016; 13(1); 203. [PubMed: 27912771].

Gene Information

Gene Name

glycoprotein

Protein Information

Protein Name

glycoprotein

NCBI Protein GI

CAB07737

Protein pI

7.1

Protein Weight

53554.36

Protein Length

578

Protein Note

Rhabdovirus spike glycoprotein; pfam00974

Protein Sequence

>CAB07737.2 glycoprotein [Viral hemorrhagic septicemia virus]
MEWNTFFLVILIIIIKSTTPQITQRPPVENISTYHADWDTPLYTHPSNCREDSFVPIRPAQLRCPHEFED
INKGLVSVPTQIIHLPLSVTSVSAVASGHYLHRVTYRVTCSTSFFGGQTIEKTILEAKLSRQEATNEASK
DHEYPFFPEPSCIWMKNNVHKDITHYYKTPKTVSVDLYSRKFLNPDFIEGVCTTSPCQTHWQGVYWVGAT
PTAHCPTSETLEGHLFTRTHDHRVVKAIVAGHHPWGLTMACTVTFCGTEWIKTDLGDLIQVTGPGGARKL
TPKKCVNTDIQMRGATDDFSYLNHLITNMAQRTECLDAHSDITASGKISSFLLSKFRPSHPGPGKAHYLL
DGQIMRGDCDYEAVVSINYNSAQYKTVNNTWKSWKRVDNNTDGYDGMIFGDKLIIPDIEKYQSVYDSGML
VQRNLVEVPHLSIVFVSNTSDLSTNHIHTNLIPSDWSFNWSLWPSLSGMGVVGGAFLLLVLCCCCKASPP
IPNYGIPMQQFSRSQMV

Epitope Information

IEDB Linear Epitope