NS1
General Information
Protegen ID
4338
Sequence Strain (Species/Organism)
African horse sickness virus
Taxonomy ID
36421
Other Database IDs
CDD:279979
Molecule Role
Protective antigen
Molecule Role Annotation
(de et al. , 2015 )
References
de et al. , 2015: de la Poza F, Marín-López A, Castillo-Olivares J, Calvo-Pinilla E, Ortego J. Identification of CD8 T cell epitopes in VP2 and NS1 proteins of African horse sickness virus in IFNAR(-/-) mice. Virus research . 2015; 210; 149-153. [PubMed: 26272673 ].
Gene Information
Gene Name
NS1
Protein Information
Protein Name
NS1
NCBI Protein GI
AKP39984
Protein pI
6.65
Protein Weight
59621.73
Protein Length
606
Protein Note
passage history: 1# BHK
Protein Sequence
>AKP39984.1 NS1 [African horse sickness virus 4]
MDRFLTYFQVRGERANAVRLFGEISEQIDCSHLKRDCFVNGICARQHFKECCNIATDNGSRTNADKLVAL
ALRALLDRQTIWTCVIKNADYVSQYADEQMEEEVNKLYDVYLQSGTREEFEGFRQRNRPSRVVMDDSCSM
LSYFYIPMNQGNPAPVAKLSRWGQFGICYYDRTNVDGLIPYDEIGLAQAIDGLKDLIEGRLPVCPYTGAN
GRINAVLHLPLEMEVIMAVQENATQLMRRAAQDFKFITHAGWRLYPRLLRQRFAIEDATEGVIHHVMLGH
LRYYDEDTSIVKYRFLNDGSLDWRTWTIPLHLMRTARLGHLQPESILVFMHKKLTCQVCFMVDLALLDTI
PVVDSKIAELTGGTDVFYTRAYVHADNHKVPNVRDLMMNEVFRKIDDHWVIQKCHTTKEAITVTAIQIQR
SIRGDGQWDTPMFHQSMALLTRLIVYWLTDVTERSAIFRLTCFAIFGCKPTARGRYIDWDDLGTFMKNVL
DGRDLTVLEDETCFISMMRMAMLHVQRSKVVCATVLEAPLEIQQVGQIVEVPFDFMHN
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
MHC restriction
Starting position
Ending position
461958
CVIKNADYV
84
93
IEDB ID
Epitope
Starting position
Ending position
MDRFLTYFQVRGERANAVRLFGEISEQIDCSHLKRDCFVNGICARQHFKECCNIATDNGSRTNADKLVALALRALLDRQTIWTCVIKNADYVSQYADEQMEEEVNKLYDVYLQSGTREEFEGFRQRNRPSRVVMDDSCSMLSYFYIPMNQGNPAPVAKLSRWGQFGICYYDRTNVDGLIPYDEIGLAQAIDGLKDLIEGRLPVCPYTGANGRINAVLHLPLEMEVIMAVQENATQLMRRAAQDFKFITHAGWRLYPRLLRQRFAIEDATEGVIHHVMLGHLRYYDEDTSIVKYRFLNDGSLDWRTWTIPLHLMRTARLGHLQPESILVFMHKKLTCQVCFMVDLALLDTIPVVDSKIAELTGGTDVFYTRAYVHADNHKVPNVRDLMMNEVFRKIDDHWVIQKCHTTKEAITVTAIQIQRSIRGDGQWDTPMFHQSMALLTRLIVYWLTDVTERSAIFRLTCFAIFGCKPTARGRYIDWDDLGTFMKNVLDGRDLTVLEDETCFISMMRMAMLHVQRSKVVCATVLEAPLEIQQVGQIVEVPFDFMHN