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BoNT/B

General Information
Protegen ID 449
Sequence Strain (Species/Organism) Clostridium botulinum B1 str. Okra
VO ID VO_0010904
Taxonomy ID 498213
Other Database IDs CDD:279999
CDD:285227
CDD:285228
CDD:285226
Molecule Role Protective antigen
Molecule Role Annotation The DNA replicon vaccine (pSCARSBHc) encoding the Hc domain of BoNT/B (BHc) induced better responses and protection against BoNT/B mouse challenge than conventional DNA vaccine. Recombinant SFV particle VRP-BHc protected mice from high-dose BoNT/B challenge (Yu et al., 2009).
The production of ciBoNT/B1 HP, ciBoNT/C1 HP, ciBoNT/E1 HP and ciBoNT/F1 HP suggest the ciBoNT HP vaccines exhibit superior potency after single vaccinations.(Webb et al., 2017)
Related Vaccines(s) C. botulinum DNA vaccine pSCARSA/BHc
References
Webb et al., 2017: Webb RP, Smith TJ, Smith LA, Wright PM, Guernieri RL, Brown JL, Skerry JC. Recombinant Botulinum Neurotoxin Hc Subunit (BoNT Hc) and Catalytically Inactive Clostridium botulinum Holoproteins (ciBoNT HPs) as Vaccine Candidates for the Prevention of Botulism. Toxins. 2017; 9(9); . [PubMed: 28869522].
Yu et al., 2009: Yu Y, Yu J, Li N, Wang S, Yu W, Sun Z. Individual and bivalent vaccines against botulinum neurotoxin serotypes A and B using DNA-based Semliki Forest virus vectors. Vaccine. 2009; 27(44); 6148-6153. [PubMed: 19712769].
Gene Information
Gene Name BoNT/B
NCBI Gene ID 6030102
Genbank Accession AB232927
Locus Tag CLD_A0068
Plasmid No pCLD
Gene Starting Position 42316
Gene Ending Position 46191
DNA Sequence
>NC_010379.1:42316-46191 Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence
ATTATTCAGTCCACCCTTCATCTTTAGGAATAAACTGCCAATTACATCCCAATTTTAAATTATATGGTTT
CCTTTTTACCTCTTTTAAGTACCATTTACTTATACAAAAATAATCTTTATACTCTTCAAATACAATTCCA
GATTCGTAGAAACGATGAATACCAATCAATCCTATCTCATCAGTACTTTCTTCATCTTTTTTAAAAAGCA
ACTGACAACTATATGTTGGCTGTTCATCATATTCTTTTATTTGTATAGTATTGTAAAACTCATCAGAATC
ACTTATAGGAGCTAAAAACAATTTTTCTTCCTCTTTCTTAAAATATTTATAGGTATATACTCTCCACTCT
TGATTTAAATTAAAAAAATCTAGATATATATAATCTTCTTTTCTAACTATATCATCATTTATAGATTGAG
AATTTGACTTTCTTCTTATAATAAATTTTTCTCCAATATATAAATCTCTATAATTTATATATTTAGAATT
TTGATTATATTTGCTACGTGTTAAAATTTCACCTACAGGTGAATCTTTCTTTAGTTTAATATATGAATTT
TTATTCCCCGCATTAAACATATAATATTCTTTATTGTACATTAAAGGATTTCCCCAAAAATCTTTTAAAT
ATTCGCTATATGATTGAATTTTATATCTTTCTTCAATATTTGATTGACTTAATTCCGTATTAAAAATACT
GAAATATTTCATCCAAATAAATTGTGTTCTATCTATATCACCATCTAATTTAAATATTATTTCACCATTA
GCAATAACTTCTCTTATATCTTTAATATCTGTATTTGATTCTAGCTTACCATTAATATAAATTTTAGCGT
TATTCAAATTATTAGTAATAGTTACAAAAAACCATCTATTTATATACTCTGATATATCTTCTCTTATGTT
ATATTCAAAAAATACCGATTTGGTTTTTCCATTTATATCAATTAAAGTCCATATTATCCTATTACCCCTA
ATAGATATTTTCCAGCCCGAATTATTTTTCATACAATTAATTATTGTATATTCATTATGAATATAATTTT
GTATACCATCATTCTTATATTTAGGTATTCTTATCCAAAAGCTAACGCTAAAATCAAGGAACACACTATT
AAATATGATATTCTGATTTTGAGTCACTCTAATCTTACTATTTGCTGAACTAGTTAATTTAAATTGATTT
TTATCATTAAGCTCGACTCCATCATATACCTCTACCTTTGCCCCATATCCTGATAAATCTATTAAATTAT
TATCCTTATATCTTAAATTTAAGATAATATTATTTAAAATTTCGCTATTATATTTATTAAACATTTCTAT
TAGTATTGTATCATTGGTATATATTGAAAGATCAAACGGCATAATGGTTTTCAAGTATTTATTTACTTTT
GATTTTTCATATTCTGCACTTCCAATCAAATATAATTTATTTTCATCTATATAATTTAACAAATTTTTTT
TGAGAGTATTATCAAAGTCTAGTAATTTTTCTACAGCTAATGGAATCATTTTTTTCATTAAATATGATAC
AGAACATCCATTTATAAAATTATTTATATTATCTATAGCTTGGTTAATACCCTCATTAAGTTTAGAATTT
ATATCATTAAAATCGATGTTAATATTTGACTTTTCTTTTTCAGAATATATATTATATCTGTATTTTATTA
TTTCTTCCAATGCTTGTGCTTGATAATTTAAAGCCTTATACATTCCCTCTTTTATTGTATAAAATTGAGT
ATTAACTGTTGAGAGCCATTGCGCTACTATTAATCCGTACATATCACTCCATTTTTCATTTCTTTTAGTT
AAAGCATTATCTATTGTTTTAATAATTTTATTTTTATTGTCAATATATGATTCTAATAAAAAGGCTCCAA
CTACAGGTATTAAAAGTTCTGGTATAAATTCTAGTAGAATACTGGCTCCTGCAATCTCAAAAGCATTTTC
AAAATTTCCTTTAGCTGTTTCATTTCCTACATTTAAAGCTAATCCTATATAAGGAACAATTAGAGATATA
TCTGCAATTTTATCCATAGTATTGCTTTTATTAGCTTCGATTACAAAATCATTTACTATCTGTTTCACCC
AACCTGCAAATAATCCTGCTTCTACCACTTTATTAGCAGTTTTAATATAATCCATAGAAAAAAATGAATA
AACTTTGTTAGAAAATAATAATGCATCATCAAATGAAGATGTTAAACTTATATCTCTTATATCTAGAGGA
AATGTCTGAGAGTATAAATATTGAAAGATGGTATTTTCATCTGTAAAAATTTTTTTTATAGCGGGTTGTT
TTTCATATACTGGAACATCTACATTAAAATCAGTAAGTGATTCTGTATTTTCACTTGGTAATTCTATTTT
ACTTATTAAATCAGTATCTAAAATTAATTCATTTATAGGGAAGTCATTTTCTATATAATTACTCTGTGTA
TTATATTCTATTCTTTCGTTTTTAGATAAATCATCTGAAAAACTATTTTTATCAGCTATAAAGAACAAAT
CTTCATTATCAACATCAATACATATTCCTGGAGCTTTAACACTTTTACACATTTGTATCTTATATACAGC
CAAATGCTCCTTGCTAATTTCTTCATAAGCTTGTTTATTTATAGCTTTATTCTGACCTCTATATTCTTTT
TCCATATCTTTATCAGATATATTAAACCCTTCCTCTATAGTATAGATTTCATTATCTAATAAATTTTTTA
TTTTTACTGGTGGTAAGGAATCACTAAAATAAGAAGCTCTAGTTTTTATTTTATAATTTTCTGCTATATT
AGTTTCTGTAAAACCAAACATTAAGCTTTTATATAATTTATCAAAACTTTCTACATCTATACTATATTTT
CCCTCAGAATCTTCAACGAATTTATATTTATCTTTAAATTTATTTTTATATATATTAATATTAATGTTAG
GATCTGATATGCAAACTAAAACCTTGTTAAGTCTATCAACTATCCCTCTAAAATTTTGCAAAACTTTATC
ATAGATACTTTTATCCGTAGAAGGAGTTATGATGCTGGGATCTTGTCCTCCAAATGTATATAGTTCTTCT
GCCTGTATAGCATCTGTAGATTGCATAAAAAATTTTTTTTCATTTGGTACAATTGGTAAATCATCTACTT
TAATGCCATATAATCCATGTAAAACATGTATAAGTTCATGCATTAATATCAAGGCTGGATCTGAAAAATA
TCCACGTCTATTAAATATACTTGCGCCTTTGTTTTCTTGAACATTATTAAATACGCTTACATATTCTGGG
CAAAACTTCATTTGCATTATACCCCCGAAGCCTTCCCTTGATGCAAAATGATTTTGTATACCTATATCTA
TAGTCTCATTTTCATTTAAAACTGGCCCAGGTCCAAATATTATTAAATTTGCGAAAATACCTTTTTTTCG
CTCCACTTCTCCTGGATTACTGATTAATTTATTAACAGTTACACTAGCAATGTTTGTGTTAAACTCTTCG
AGTGGAACACGTCTATCTCCAAGATAAGGTATACCATTTATAATCATCTCTAATAACTTTTCACCCAATG
GTTTTGATTTGATTCTATTAAATAACTTGATCATTGTTTGTAAAAATATATTCTTTTTATCATTAGTATT
TAAGTAATCTGGATCATAATATTCACAAACATCTCTATTAAAAATACCGGAACTTTTATTAAAATCCTCA
GGTTTATATCCAAAAGTATATCTTTCCGGTATTATCCAAATACGATCTGTGATTTTAAAAGCTTTATAAT
ATCTCCCCGTACCTCTCGCAAATGGAGGCTCCATCATAATAATATTATTATTATCAATAGGATCATTATA
ATTAAAATTATTTATTGTAACTGGCA

Protein Information
Protein Name botulinum neurotoxin type B
NCBI Protein GI 169834607
Protein Accession YP_001693307
3D structure: PDB ID 1S0F
Protein pI 4.97
Protein Weight 145339.54
Protein Length 1291
Protein Note Clostridial neurotoxin zinc protease; pfam01742
Protein Sequence
>YP_001693307.1 botulinum neurotoxin type B (plasmid) [Clostridium botulinum B1 str. Okra]
MPVTINNFNYNDPIDNNNIIMMEPPFARGTGRYYKAFKITDRIWIIPERYTFGYKPEDFNKSSGIFNRDV
CEYYDPDYLNTNDKKNIFLQTMIKLFNRIKSKPLGEKLLEMIINGIPYLGDRRVPLEEFNTNIASVTVNK
LISNPGEVERKKGIFANLIIFGPGPVLNENETIDIGIQNHFASREGFGGIMQMKFCPEYVSVFNNVQENK
GASIFNRRGYFSDPALILMHELIHVLHGLYGIKVDDLPIVPNEKKFFMQSTDAIQAEELYTFGGQDPSII
TPSTDKSIYDKVLQNFRGIVDRLNKVLVCISDPNININIYKNKFKDKYKFVEDSEGKYSIDVESFDKLYK
SLMFGFTETNIAENYKIKTRASYFSDSLPPVKIKNLLDNEIYTIEEGFNISDKDMEKEYRGQNKAINKQA
YEEISKEHLAVYKIQMCKSVKAPGICIDVDNEDLFFIADKNSFSDDLSKNERIEYNTQSNYIENDFPINE
LILDTDLISKIELPSENTESLTDFNVDVPVYEKQPAIKKIFTDENTIFQYLYSQTFPLDIRDISLTSSFD
DALLFSNKVYSFFSMDYIKTANKVVEAGLFAGWVKQIVNDFVIEANKSNTMDKIADISLIVPYIGLALNV
GNETAKGNFENAFEIAGASILLEFIPELLIPVVGAFLLESYIDNKNKIIKTIDNALTKRNEKWSDMYGLI
VAQWLSTVNTQFYTIKEGMYKALNYQAQALEEIIKYRYNIYSEKEKSNINIDFNDINSKLNEGINQAIDN
INNFINGCSVSYLMKKMIPLAVEKLLDFDNTLKKNLLNYIDENKLYLIGSAEYEKSKVNKYLKTIMPFDL
SIYTNDTILIEMFNKYNSEILNNIILNLRYKDNNLIDLSGYGAKVEVYDGVELNDKNQFKLTSSANSKIR
VTQNQNIIFNSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKNNSGWKISIRGNRIIWTLIDING
KTKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTDIKDIREVIANGEIIFKLDGDIDR
TQFIWMKYFSIFNTELSQSNIEERYKIQSYSEYLKDFWGNPLMYNKEYYMFNAGNKNSYIKLKKDSPVGE
ILTRSKYNQNSKYINYRDLYIGEKFIIRRKSNSQSINDDIVRKEDYIYLDFFNLNQEWRVYTYKYFKKEE
EKLFLAPISDSDEFYNTIQIKEYDEQPTYSCQLLFKKDEESTDEIGLIGIHRFYESGIVFEEYKDYFCIS
KWYLKEVKRKPYNLKLGCNWQFIPKDEGWTE

Epitope Information
IEDB Linear Epitope