PUUVsSgp1
General Information
Protegen ID
490
Sequence Strain (Species/Organism)
Puumala orthohantavirus
VO ID
VO_0011088
Taxonomy ID
1980486
Molecule Role
Protective antigen
Molecule Role Annotation
To investigate the ability of recombinant N (rN, nucleocapsid proteins) from different hantaviruses to elicit cross-protection, we immunized bank voles with rN from Puumala (PUUV), Topografov (TOPV), Andes (ANDV), and Dobrava (DOBV) viruses and subsequently challenged them with PUUV. All animals immunized with PUUV (PUUVsSgp1) and TOPV rN were completely protected (de et al. , 2002 ).
Related Vaccines(s)
Puumala virus PUUVsSgp1 (NP) protein vaccine
References
de Carvalho Nicacio et al. , 2002: de Carvalho Nicacio C, Gonzalez Della Valle M, Padula P, Bjorling E, Plyusnin A, Lundkvist A. Cross-protection against challenge with Puumala virus after immunization with nucleocapsid proteins from different hantaviruses. Journal of virology . 2002 Jul; 76(13); 6669-77. [PubMed: 12050380 ].
Gene Information
Gene Name
PUUVsSgp1
NCBI Gene ID
2943083
Genbank Accession
HE801633
Locus Tag
PUUVsSgp1
Gene Starting Position
42
Gene Ending Position
1343
DNA Sequence
>NC_005224.1:42-1343 Puumala virus segment S, complete sequence
AATGAGTGACTTGACAGATATCCAAGAGGATATAACCCGCCATGAACAGCAACTTATTGTTGCCAGACAA
AAACTTAAGGATGCAGAGAGAGCAGTGGAAGTGGACCCAGATGACGTTAATAAAAACACACTGCAAGCCA
GGCAACAAACAGTGTCAGCACTGGAGGACAAACTCGCAGACTACAAGAGAAGGATGGCAGATGCTGTGTC
CAGGAAAAAAATGGATACTAAACCTACTGACCCGACTGGGATTGAACCTGATGACCACCTCAAGGAGAGA
TCAAGCCTTAGGTATGGAAATGTCCTTGATGTAAATGCAATTGACATTGAAGAACCAAGTGGCCAAACAG
CAGATTGGTATACAATTGGAGTGTATGTGATAGGGTTCACACTTCCTATCATCCTTAAAGCTTTATACAT
GCTCTCAACGCGTGGGAGACAGACTGTAAAGGAAAATAAGGGGACACGTATAAGGTTTAAGGATGATACA
TCATTTGAAGACATCAATGGCATAAGGAGACCAAAGCATTTATATGTTTCTATGCCTACTGCCCAGTCAA
CTATGAAAGCAGAAGAACTCACACCTGGCAGATTTCGCACAATAGTATGTGGTCTTTTTCCCACTCAGAT
CCAGGTTCGTAACATCATGAGTCCAGTTATGGGGGTCATTGGTTTTTCATTCTTTGTGAAGGATTGGTCT
GAGAGAATCAGAGAGTTCATGGAAAAAGAGTGCCCATTCATAAAGCCTGAAGTAAAACCAGGCACACCAG
CACAGGAGATTGAGATGTTAAAAAGAAATAAGATCTACTTTATGCAGCGCCAGGATGTGCTTGACAAAAA
TCATGTGGCAGACATTGACAAGTTAATTGACTATGCAGCCTCTGGAGACCCTACATCACCTGACAACATT
GATTCGCCTAATGCACCATGGGTCTTTGCATGTGCACCAGACCGATGCCCACCAACATGTATCTATGTTG
CAGGGATGGCAGAGCTTGGGGCCTTTTTTTCAATATTGCAGGACATGAGAAACACAATAATGGCATCTAA
GACTGTTGGCACAGCAGAAGAGAAATTAAAGAAAAAGTCTTCCTTTTACCAATCTTACCTGCGTCGAACT
CAATCAATGGGAATTCAGCTTGATCAAAGAATTATCCTCTTGTTTATGTTGGAATGGGGCAAAGAGATGG
TAGATCACTTCCATCTTGGTGATGATATGGATCCAGAGCTCAGAGGTCTTGCACAGGCACTGATAGATCA
AAAGGTCAAGGAAATATCGAACCAGGAACCACTAAAGATATA
Protein Information
Protein Name
nucleocapsid protein
NCBI Protein GI
38371721
Protein Accession
NP_941984
Protein pI
6.05
Protein Weight
46970.43
Protein Length
433
Protein Sequence
>NP_941984.1 nucleocapsid protein [Puumala orthohantavirus]
MSDLTDIQEDITRHEQQLIVARQKLKDAERAVEVDPDDVNKNTLQARQQTVSALEDKLADYKRRMADAVS
RKKMDTKPTDPTGIEPDDHLKERSSLRYGNVLDVNAIDIEEPSGQTADWYTIGVYVIGFTLPIILKALYM
LSTRGRQTVKENKGTRIRFKDDTSFEDINGIRRPKHLYVSMPTAQSTMKAEELTPGRFRTIVCGLFPTQI
QVRNIMSPVMGVIGFSFFVKDWSERIREFMEKECPFIKPEVKPGTPAQEIEMLKRNKIYFMQRQDVLDKN
HVADIDKLIDYAASGDPTSPDNIDSPNAPWVFACAPDRCPPTCIYVAGMAELGAFFSILQDMRNTIMASK
TVGTAEEKLKKKSSFYQSYLRRTQSMGIQLDQRIILLFMLEWGKEMVDHFHLGDDMDPELRGLAQALIDQ
KVKEISNQEPLKI
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
Starting position
Ending position
47077
PDDVNKNTLQ
36
46
637
ADAVSRKKMD
66
76
54237
RIRFKDDTSF
156
166
4219
ARQKLKDAER
21
31
74501
YKRRMADAVS
61
71
5310
AVEVDPDDVN
31
41
54375
RKKMDTKPTD
71
81
29883
KALYMLSTRG
136
146
16229
FIKPEVKPGT
246
256
70109
VNKNTLQARQQTVSA
39
54
69289
VKPGTPAQEI
251
261
52060
QQLIVARQKLKDAER
16
31
24330
HLYVSMPTAQ
176
186
9399
DMRNTIMASK
341
351
13501
ENKGTRIRFK
151
161
42327
MPTAQSTMKA
181
191
55494
RQTVKENKGT
146
156
8917
DKLADYKRRM
56
66
32616
KNTLQARQQT
41
51
4226
ARQQTVSALE
46
56
70878
VSALEDKLAD
51
61
62824
TADWYTIGVY
116
126
32617
KNTLQARQQT
41
51
57770
SFFVKDWSER
226
236
30596
KERSSLRYGN
91
101
68420
VFACAPDRCP
311
321
11353
EDINGIRRPK
166
176
11772
EELTPGRFRT
191
201
8918
DKLADYKRRM
56
66
30105
KDAERAVEVD
26
36
48603
PNAPWVFACA
306
316
10824
DWSERIREFM
231
241
13063
ELGAFFSILQ
331
341
52777
QVRNIMSPVM
211
221
54238
RIRFKDDTSF
156
166
29068
ITRHEQQLIV
11
21
13763
EPSGQTADWY
111
121
31701
KKSSFYQSYL
361
371
13396
EMLKRNKIYF
261
271
24209
HLGDDMDPEL
401
411
5311
AVEVDPDDVN
31
41
42923
MVDHFHLGDD
396
406
4220
ARQKLKDAER
21
31
28389
IRRPKHLYVS
171
181
22999
GVIGFSFFVK
221
231
25013
HVADIDKLID
281
291
69441
VLDVNAIDIE
101
111
1872
AIDIEEPSGQ
106
116
26575
IILKALYMLSTRGR
133
147
29578
IYFMQRQDVLDKNH
268
282
18951
GDDMDPELRGLAQA
403
417
76234
YVAGMAELGAFFSI
325
339
68800
VGTAEEKLKKKSSF
352
366
44563
NKNTLQARQQTVSA
40
54
432
AASGDPTSPDNIDS
292
306
55066
RNTIMASKTVGTAE
343
357
1299
AFFSILQDMRNTIM
334
348
41592
MGIQLDQRIILLFM
376
390
4074
AQSTMKAEELTPGR
184
198
57771
SFFVKDWSERIREF
226
240
34727
LADYKRRMADAVSR
58
72
63856
TGIEPDDHLKERSS
82
96
50307
QALIDQKVKEISNQ
415
429
8804
DITRHEQQLIVARQ
10
24
30130
KDDTSFEDINGIRR
160
174
39199
LRRTQSMGIQLDQR
370
384
54047
RHEQQLIVARQKLK
13
27
56089
RTIVCGLFPTQIQV
199
213
65938
TQSMGIQLDQRIIL
373
387
9472
DNIDSPNAPWVFAC
301
315
17052
FMLEWGKEMVDHFH
388
402
30597
KERSSLRYGNVLDV
91
105
12440
EIEMLKRNKIYFMQ
259
273
25653
IDQKVKEISNQEPL
418
432
63215
TDPTGIEPDDHLKE
79
93
22799
GTRIRFKDDTSFED
154
168
52466
QTADWYTIGVYVIG
115
129
11354
EDINGIRRPKHLYV
166
180
26225
IGFSFFVKDWSERI
223
237
69199
VKDWSERIREFMEK
229
243
52456
QSYLRRTQSMGIQL
367
381
12660
EKECPFIKPEVKPGTPAQEIEMLKRNKIYF
241
271
51313
QLDQRIILLFMLEW
379
393
34065
KVKEISNQEPLKI
421
434
65021
TLQARQQTVSALED
43
57
64645
TKPTDPTGIEPDDH
76
90
46417
NVLDVNAIDIEEPS
100
114
61862
STRGRQTVKENKGT
142
156
73067
WSERIREFMEKECP
232
246
19081
GDPTSPDNIDSPNA
295
309
73191
WVFACAPDRCPPTC
310
324
21247
GMAELGAFFSILQD
328
342
13065
ELGAFFSILQDMRN
331
345
7885
DDVNKNTLQARQQT
37
51
22178
GRQTVKENKGTRIR
145
159
67042
TVKENKGTRIRFKD
148
162
4228
ARQQTVSALEDKLA
46
60
41644
MGVIGFSFFVKDWS
220
234
13247
ELRGLAQALIDQKV
409
423
20769
GLAQALIDQKVKEI
412
426
13503
ENKGTRIRFKDDTS
151
165
65210
TMKAEELTPGRFRT
187
201
883
AEELTPGRFRTIVC
190
204
11370
EDKLADYKRRMADA
55
69
22037
GRFRTIVCGLFPTQ
196
210
28144
IQEDITRHEQQLIV
7
21
44293
NIMSPVMGVIGFSF
214
228
66194
TSFEDINGIRRPKH
163
177
50494
QDMRNTIMASKTVG
340
354
42329
MPTAQSTMKAEELT
181
195
55007
RNKIYFMQRQDVLD
265
279
41259
MDPELRGLAQALID
406
420
25786
IEEPSGQTADWYTI
109
123
41979
MLKRNKIYFMQRQD
262
276
16120
FHLGDDMDPELRGL
400
414
52660
QTVSALEDKLADYK
49
63
40099
LTPGRFRTIVCGLF
193
207
44002
NGIRRPKHLYVSMP
169
183
72183
VYVIGFTLPIILKA
124
138
66354
TSPDNIDSPNAPWV
298
312
58614
SILQDMRNTIMASK
337
351
10843
DWYTIGVYVIGFTL
118
132
26227
IGFTLPIILKALYM
127
141
13248
ELRGLAQALIDQKVK
409
424
9401
DMRNTIMASKTVGTA
341
356
39714
LSTRGRQTVK
141
151
13064
ELGAFFSILQDMR
331
344
39198
LRRTQSMGIQLDQ
370
383
29067
ITRHEQQLIV
11
21
2621
ALIDQKVKEI
416
426
53905
RGLAQALIDQ
411
421
11724
EEKLKKKSSF
356
366
47078
PDDVNKNTLQ
36
46
56852
SALEDKLADYKRRM
52
66
14751
EVKPGTPAQEIEML
250
264
61192
SSLRYGNVLDVNAI
94
108
29205
IVARQKLKDAERAV
19
33
52059
QQLIVARQKLKDAE
16
30
52058
QQLIVARQKL
16
26
67017
TVGTAEEKLK
351
361
64317
TIGVYVIGFTLPII
121
135
60319
SPVMGVIGFSFFVK
217
231
57957
SFYQSYLRRTQSMG
364
378
28291
IRFKDDTSFEDING
157
171
54233
RIREFMEKECPFIK
235
249
49388
PSGQTADWYTIGVY
112
126
8760
DIQEDITRHE
6
16
60714
SRKKMDTKPTDPTG
70
84
10677
DVNAIDIEEPSGQT
103
117
12659
EKECPFIKPEVKPG
241
255
677
ADIDKLIDYAASGD
283
297
1146
AERAVEVDPDDVNK
28
42
47765
PGTPAQEIEMLKRN
253
267
7671
DAVSRKKMDTKPTD
67
81
58954
SKTVGTAEEKLKKK
349
363
56537
RYGNVLDVNAIDIE
97
111
42532
MSDLTDIQEDITRH
1
15
32296
KMDTKPTDPTGIEP
73
87
52778
QVRNIMSPVMGVIG
211
225
5312
AVEVDPDDVNKNTL
31
45
74503
YKRRMADAVSRKKM
61
75
67972
VDHFHLGDDMDPEL
397
411
8927
DKLIDYAASGDPTS
286
300
50528
QDVLDKNHVADIDK
274
288
39849
LTDIQEDITRHEQQ
4
18
55436
RQKLKDAERAVEVD
22
36
54848
RMADAVSRKKMDTK
64
78
55675
RRPKHLYVSMPTAQ
172
186
35199
LDKNHVADIDKLID
277
291
44172
NHVADIDKLIDYAA
280
294
881
AEEKLKKKSSFYQS
355
369
31133
KHLYVSMPTAQSTM
175
189
35947
LFPTQIQVRNIMSP
205
219
12050
EFMEKECPFIKPEV
238
252
6762
CPFIKPEVKPGTPA
244
258
27451
IMASKTVGTAEEKL
346
360
36816
LKDAERAVEVDPDD
25
39
65881
TQIQVRNIMSPVMG
208
222
68034
VDPDDVNKNTLQAR
34
48
47072
PDDHLKERSS
86
96
46912
PAQEIEMLKR
256
266
150982
FEDINGIRRP
165
175
10387
DTKPTDPTGIEPDDHLKERSSLRYGNVLDVNAIDIEEPSGQTADW
75
120
39251
LRYGNVLDVN
96
106
70879
VSALEDKLAD
51
61
64644
TKPTDPTGIE
76
86
4227
ARQQTVSALE
46
56
49631
PTGIEPDDHL
81
91
55751
RRTQSMGIQL
371
381
67018
TVGTAEEKLK
351
361
30104
KDAERAVEVD
26
36
27449
IMASKTVGTA
346
356
42408
MQRQDVLDKNHVAD
271
285
65006
TLPIILKALYMLST
130
144
638
ADAVSRKKMD
66
76
41258
MDPELRGLAQ
406
416
42531
MSDLTDIQED
1
11
568482
STRGR
142
147
MSDLTDIQEDITRHEQQLIVARQKLKDAERAVEVDPDDVNKNTLQARQQTVSALEDKLADYKRRMADAVSRKKMDTKPTDPTGIEPDDHLKERSSLRYGNVLDVNAIDIEEPSGQTADWYTIGVYVIGFTLPIILKALYMLSTRGRQTVKENKGTRIRFKDDTSFEDINGIRRPKHLYVSMPTAQSTMKAEELTPGRFRTIVCGLFPTQIQVRNIMSPVMGVIGFSFFVKDWSERIREFMEKECPFIKPEVKPGTPAQEIEMLKRNKIYFMQRQDVLDKNHVADIDKLIDYAASGDPTSPDNIDSPNAPWVFACAPDRCPPTCIYVAGMAELGAFFSILQDMRNTIMASKTVGTAEEKLKKKSSFYQSYLRRTQSMGIQLDQRIILLFMLEWGKEMVDHFHLGDDMDPELRGLAQALIDQKVKEISNQEPLKI