HA
General Information
Protegen ID
540
Sequence Strain (Species/Organism)
Influenza A virus (A/chicken/Henan/12/2004(H5N1))
VO ID
VO_0011133
Taxonomy ID
319102
Other Database IDs
CDD:278910
Molecule Role
Protective antigen
Molecule Role Annotation
Plasmids carrying the HA, NA, NP, M1, and M2 genes, respectively, of the avian influenza virus (AIV) A/Chicken/Henan/12/2004(H5N1) strain were administered to mice, and the mice were challenged with the homologous virus later. The mice immunized with HA plasmid once and the NA plasmid twice survived 100% (Chen et al. , 2009 ).
Related Vaccines(s)
Influenza virus DNA vaccine encoding HA from Influenza A virus (A/chicken/Henan/12/2004(H5N1))
References
Chen et al. , 2009: Chen Q, Kuang H, Wang H, Fang F, Yang Z, Zhang Z, Zhang X, Chen Z. Comparing the ability of a series of viral protein-expressing plasmid DNAs to protect against H5N1 influenza virus. Virus genes . 2009; 38(1); 30-38. [PubMed: 19067149 ].
Gene Information
Gene Name
HA
Protein Information
Protein Name
hemagglutinin
NCBI Protein GI
61698018
Protein pI
7.19
Protein Weight
61969.572
Protein Length
656
Protein Note
Haemagglutinin; pfam00509
Protein Sequence
>AAX53506.1 hemagglutinin [Influenza A virus (A/chicken/Henan/12/2004(H5N1))]
MEKIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRD
CSVAGWLLGNPMCDEFINVPEWSYIVEKASPANGLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSN
HEASSGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNP
TTYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAI
MKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKRGLFG
AIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLE
RRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKC
DNECMESVRNGTYDYPQYSEEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNG
SLQCRICI
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
Starting position
Ending position
20838
GLFGAIAGFIE
347
358
538659
FGAIAGFIEG
349
359
97578
QKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNK
388
429
97413
KCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRN
293
336
97700
TNQEDLLVLWGIHHPNDAAEQT
183
205
97441
LFGAIAGFIEGGWQGMVDGWYG
348
370
97376
GYHHSNEQGSGYAADKESTQKAIDGVTNK
369
398
97348
GLFGAIAGFIEGGW
347
361
97301
FFWTILKP
244
252
20836
GLFGAIAGF
347
356
97771
WYGYHHSN
367
375
97231
CNTKCQTP
290
298
97387
HNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKRGLFGA
308
352
224827
KPNDAINF
250
258
138194
IIPKSSWS
132
140
167382
RERRRKKRGLFGAIA
339
354
148521
CNTKCQTPMGAINSS
290
305
163243
RKKRGLFGAIAGFIE
343
358
162644
KESTQKAIDGVTNKVNS
384
401
243067
QEDLLVLWGIH
185
196
133590
GMVDGWYG
362
370
133748
YNAELLV
440
447
167383
RERRRKKRGLFGAIAGFI
339
357
177101
IATRSKVNGQSGRM
229
243
177300
STQKAIDGVTNKVNSIIDK
386
405
176979
CYPGDFNDYEELK
106
119
177301
STYPTIKRSYNNTNQ
171
186
181236
NSPQRER
335
342
243602
VKPLI
63
68
242419
DLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEK
59
99
243006
NGNFIAPEYAYKI
260
273
243849
WLLGNP
76
82
745433
WYGYHH
367
373
745428
WGIHH
192
197
29690
IYSTVASSL
535
544
221495
WMCSNGSLQCRICI
555
569
738340
GLFGAIAGFIEGGWQGMVDGWYGYHHSN
347
375
837494
HSNEQGSGYAADKE
372
386
837985
MENERTLDFHDSNV
448
462
838978
YSEEARLKREEISG
508
522
837010
EEARLKREEISG
510
522
840897
LVLWGIHHP
189
198
840970
WSYIVE
92
98
177340
VDGWYGYHHSNEQGSGYA
364
382
177236
RKKRGLFGAIAGFIEGGW
343
361
923970
YAADKESTQKAIDGVTNKVN
380
400
MEKIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKASPANGLCYPGDFNDYEELKHLLSRINHFEKIQIIPKSSWSNHEASSGVSSACPYQGKSSFFRNVVWLIKKNSTYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTRLYQNPTTYISVGTSTLNQRLVPKIATRSKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRICI