VIOLIN: Vaccine Investigation and Online Information Network

NA from A/Puerto Rico/8/1934(H1N1)

General Information

Protegen ID

1214

Sequence Strain (Species/Organism)

Influenza A virus (A/Puerto Rico/8/1934(H1N1))

Taxonomy ID

211044

Molecule Role

Protective antigen

Related Vaccines(s)

Influenza virus DNA vaccine NA-DNA , Influenza virus DNA vaccine pIRES/HA/IL-12p35 + pIRES/NA/IL-12p40 , Influenza virus DNA vaccine pIRES/NA expressing NA , Influenza virus DNA vaccine pIRES/NA/GM-CSF encoding NA , Influenza virus DNA vaccine pIRES/NA/IL-2 encoding NA

References

Gene Information

Gene Name

NA from A/Puerto Rico/8/1934(H1N1)

NCBI Gene ID

956530

Genbank Accession

J02146

Locus Tag

FLUAVs6gp1

Gene Starting Position

Gene Ending Position

1384

DNA Sequence

>NC_002018.1:20-1384 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) segment 6, complete sequence
AATGAATCCAAATCAGAAAATAATAACCATTGGATCAATCTGTCTGGTAGTCGGACTAATTAGCCTAATA
TTGCAAATAGGGAATATAATCTCAATATGGATTAGCCATTCAATTCAAACTGGAAGTCAAAACCATACTG
GAATATGCAACCAAAACATCATTACCTATAAAAATAGCACCTGGGTAAAGGACACAACTTCAGTGATATT
AACCGGCAATTCATCTCTTTGTCCCATCCGTGGGTGGGCTATATACAGCAAAGACAATAGCATAAGAATT
GGTTCCAAAGGAGACGTTTTTGTCATAAGAGAGCCCTTTATTTCATGTTCTCACTTGGAATGCAGGACCT
TTTTTCTGACCCAAGGTGCCTTACTGAATGACAGGCATTCAAATGGGACTGTTAAGGACAGAAGCCCTTA
TAGGGCCTTAATGAGCTGCCCTGTCGGTGAAGCTCCGTCCCCGTACAATTCAAGATTTGAATCGGTTGCT
TGGTCAGCAAGTGCATGTCATGATGGCATGGGCTGGCTAACAATCGGAATTTCAGGTCCAGATAATGGAG
CAGTGGCTGTATTAAAATACAACGGCATAATAACTGAAACCATAAAAAGTTGGAGGAAGAAAATATTGAG
GACACAAGAGTCTGAATGTGCCTGTGTAAATGGTTCATGTTTTACTATAATGACTGATGGCCCGAGTGAT
GGGCTGGCCTCGTACAAAATTTTCAAGATCGAAAAGGGGAAGGTTACTAAATCAATAGAGTTGAATGCAC
CTAATTCTCACTATGAGGAATGTTCCTGTTACCCTGATACCGGCAAAGTGATGTGTGTGTGCAGAGACAA
TTGGCATGGTTCGAACCGGCCATGGGTGTCTTTCGATCAAAACCTGGATTATCAAATAGGATACATCTGC
AGTGGGGTTTTCGGTGACAACCCGCGTCCCAAAGATGGAACAGGCAGCTGTGGTCCAGTGTATGTTGATG
GAGCAAACGGAGTAAAGGGATTTTCATATAGGTATGGTAATGGTGTTTGGATAGGAAGGACCAAAAGTCA
CAGTTCCAGACATGGGTTTGAGATGATTTGGGATCCTAATGGATGGACAGAGACTGATAGTAAGTTCTCT
GTGAGGCAAGATGTTGTGGCAATGACTGATTGGTCAGGGTATAGCGGGAGTTTCGTTCAACATCCTGAGC
TAACAGGGCTAGACTGTATAAGGCCGTGCTTCTGGGTTGAATTAATCAGGGGACGACCTAAAGAAAAAAC
AATCTGGACTAGTGCGAGCAGCATTTCTTTTTGTGGCGTGAATAGTGATACTGTAGATTGGTCTTGGCCA
GACGGTGCTGAGTTGCCATTCACCATTGACAAGTA

Protein Information

Protein Name

neuraminidase

NCBI Protein GI

8486128

Protein Accession

NP_040981

Protein pI

7.51

Protein Weight

47364.16

Protein Length

454

Protein Sequence

>NP_040981.1 neuraminidase [Influenza A virus (A/Puerto Rico/8/1934(H1N1))]
MNPNQKIITIGSICLVVGLISLILQIGNIISIWISHSIQTGSQNHTGICNQNIITYKNSTWVKDTTSVIL
TGNSSLCPIRGWAIYSKDNSIRIGSKGDVFVIREPFISCSHLECRTFFLTQGALLNDRHSNGTVKDRSPY
RALMSCPVGEAPSPYNSRFESVAWSASACHDGMGWLTIGISGPDNGAVAVLKYNGIITETIKSWRKKILR
TQESECACVNGSCFTIMTDGPSDGLASYKIFKIEKGKVTKSIELNAPNSHYEECSCYPDTGKVMCVCRDN
WHGSNRPWVSFDQNLDYQIGYICSGVFGDNPRPKDGTGSCGPVYVDGANGVKGFSYRYGNGVWIGRTKSH
SSRHGFEMIWDPNGWTETDSKFSVRQDVVAMTDWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKEKT
IWTSASSISFCGVNSDTVDWSWPDGAELPFTIDK

Vaxign Prediction

Localization(Probability)

(Prob.=0)

Adhesin Probability

0.568

Trans-membrane Helices

Detailed Vaxign Results

Vaxign Results

Epitope Information

IEDB Linear Epitope