VIOLIN Logo
VO Banner
Search: for Help
Protegen Home
Introduction
Statistics
News and Updates
Protegen Query
Protegen BLAST
Selected Bacteria
Brucella spp. (26)
B. anthracis (14)
E. coli (40)
M. tuberculosis (26)
N. meningitidis (18)
Selected Viruses
Ebola virus (19)
HIV (41)
Influenza virus (50)
Selected Parasites
Plasmodium (47)
Data Submission
Data Exchange
Data Download
Documentation
FAQs
Disclaimer
Contact Us
UMMS Logo


nucleocapsid

General Information
Protegen ID 1236
Sequence Strain (Species/Organism) Viral hemorrhagic septicemia virus DK-3592B
Taxonomy ID 11287
Other Database IDs CDD:281242
Molecule Role Protective antigen
Related Vaccines(s) VHSV DNA vaccine pCMV-vhsN encoding nucleocapsid protein N and glycoprotein G
References  
Gene Information
Gene Name nucleocapsid
Protein Information
Protein Name nucleocapsid protein
NCBI Protein GI 3282333
Protein pI 4.89
Protein Weight 41709.47
Protein Length 490
Protein Note N protein
Protein Sequence
>AAC24962.1 nucleocapsid protein, partial [Viral hemorrhagic septicemia virus]
MEGGIRAAFSGLNDVRIDPTGGEGRVLVPGDVELIVYVGGFGEEDRKVIVDALSALGGPQTVQALSVLLS
YVLQGNTQEDLETKCKVLTDMGFKVTQAVRATSIEAGIMMPMRELALTVNDDNLMEIVKGTLMTCSLLTK
YSVDKMIKYITKKLGELADTQGVGELQHFTADKAAIRKLAGCVRPGQKITKALYAFILTEIADPTTQSRA
RAMGALRLNGTGMTMIGLFTQAANNLGIAPAKLLEDLCMESLVESARRIIQLMRQVSEAKSIQERYAIMM
SRMLGESYYKSYGLNDNSKISYILSQISGKYAVDSLEGLEGIKVTEKFREFAELVAEVLVDKYERIGEDS
TEVSDVIKEAARQHARRTSAKPEPKARNFRSSTGRGKEQETGESDDDDYPEDSD

Epitope Information
IEDB Linear Epitope