nucleocapsid |
| General Information |
| Protegen ID |
1236 |
|
Sequence Strain (Species/Organism) |
Viral hemorrhagic septicemia virus DK-3592B |
|
Taxonomy ID |
11287
|
|
Other Database IDs |
CDD:281242 |
|
Molecule Role |
Protective antigen |
| Related Vaccines(s) |
VHSV DNA vaccine pCMV-vhsN encoding nucleocapsid protein N and glycoprotein G
|
| References |
|
| Gene Information |
|
Gene Name |
nucleocapsid |
| Protein Information |
|
Protein Name |
nucleocapsid protein |
|
NCBI Protein GI |
3282333
|
|
Protein pI |
4.89 |
|
Protein Weight |
41709.47 |
|
Protein Length |
490 |
|
Protein Note |
N protein |
|
Protein Sequence |
>AAC24962.1 nucleocapsid protein, partial [Viral hemorrhagic septicemia virus]
MEGGIRAAFSGLNDVRIDPTGGEGRVLVPGDVELIVYVGGFGEEDRKVIVDALSALGGPQTVQALSVLLS
YVLQGNTQEDLETKCKVLTDMGFKVTQAVRATSIEAGIMMPMRELALTVNDDNLMEIVKGTLMTCSLLTK
YSVDKMIKYITKKLGELADTQGVGELQHFTADKAAIRKLAGCVRPGQKITKALYAFILTEIADPTTQSRA
RAMGALRLNGTGMTMIGLFTQAANNLGIAPAKLLEDLCMESLVESARRIIQLMRQVSEAKSIQERYAIMM
SRMLGESYYKSYGLNDNSKISYILSQISGKYAVDSLEGLEGIKVTEKFREFAELVAEVLVDKYERIGEDS
TEVSDVIKEAARQHARRTSAKPEPKARNFRSSTGRGKEQETGESDDDDYPEDSD
|
| Epitope Information |
| IEDB Linear Epitope |
|
| IEDB ID |
Epitope |
MHC restriction |
Starting position |
Ending position |
| IEDB ID |
Epitope |
Starting position |
Ending position |
|
|
|
MEGGIRAAFSGLNDVRIDPTGGEGRVLVPGDVELIVYVGGFGEEDRKVIVDALSALGGPQTVQALSVLLSYVLQGNTQEDLETKCKVLTDMGFKVTQAVRATSIEAGIMMPMRELALTVNDDNLMEIVKGTLMTCSLLTKYSVDKMIKYITKKLGELADTQGVGELQHFTADKAAIRKLAGCVRPGQKITKALYAFILTEIADPTTQSRARAMGALRLNGTGMTMIGLFTQAANNLGIAPAKLLEDLCMESLVESARRIIQLMRQVSEAKSIQERYAIMMSRMLGESYYKSYGLNDNSKISYILSQISGKYAVDSLEGLEGIKVTEKFREFAELVAEVLVDKYERIGEDSTEVSDVIKEAARQHARRTSAKPEPKARNFRSSTGRGKEQETGESDDDDYPEDSD
|