VIOLIN: Vaccine Investigation and Online Information Network

A27L

General Information

Protegen ID

1404

Sequence Strain (Species/Organism)

Vaccinia virus

Taxonomy ID

10245

Molecule Role

Protective antigen

Related Vaccines(s)

Vaccina Virus Vaccine A27/B5/CpG7909 , Vaccinia virus DNA vaccine 4pox

References

Gene Information

Gene Name

A27L

NCBI Gene ID

3707680

Genbank Accession

AY160184

Locus Tag

VACWR150

Gene Starting Position

140012

Gene Ending Position

140344

DNA Sequence

>NC_006998.1:140012-140344 Vaccinia virus, complete genome
GTTACTCATATGGGCGCCGTCCAGTCTGAACATCAATCTTTTTAGCCAGAGATATCATAGCCGCTCTTAG
AGTTTCAGCGTGATTTTCCAACCTAAATAGAACTTCATCGTTGCGTTTACAACACTTTTCTATTTGTTCA
AACTTTGTTGTTACATTAGTAATCTTTTTTTCCAAATTAGTTAGCCGTTGTTTGAGAGTTTCCTCATTGT
CGTCTTCATCGGCTTTAACAATTGCTTCGCGTTTAGCCTCTGGCTTTTTAGCAGCCTTTGTAGAAAAAAA
TTCAGTTGCTGGAATTGCAAGATCGTCATCTCCGGGGAAAAGAGTTCCGTCCA

Protein Information

Protein Name

IMV surface protein

NCBI Protein GI

66275947

Protein Accession

YP_233032

Protein pI

5.33

Protein Weight

12174.92

Protein Length

110

Protein Note

similar to VACCP-A27L; roles in IMV-cell attachment, fusion, and microtubule transport

Protein Sequence

>YP_233032.1 IMV surface protein [Vaccinia virus]
MDGTLFPGDDDLAIPATEFFSTKAAKKPEAKREAIVKADEDDNEETLKQRLTNLEKKITNVTTKFEQIEK
CCKRNDEVLFRLENHAETLRAAMISLAKKIDVQTGRRPYE

Vaxign Prediction

Localization(Probability)

(Prob.=0)

Adhesin Probability

0.411

Trans-membrane Helices

Detailed Vaxign Results

Vaxign Results

Epitope Information

IEDB Linear Epitope