VIOLIN Logo
VO Banner
Search: for Help
Protegen Home
Introduction
Statistics
News and Updates
Protegen Query
Protegen BLAST
Selected Bacteria
Brucella spp. (26)
B. anthracis (14)
E. coli (40)
M. tuberculosis (26)
N. meningitidis (18)
Selected Viruses
Ebola virus (19)
HIV (41)
Influenza virus (50)
Selected Parasites
Plasmodium (47)
Data Submission
Data Exchange
Data Download
Documentation
FAQs
Disclaimer
Contact Us
UMMS Logo


PA

General Information
Protegen ID 1640
Sequence Strain (Species/Organism) Bacillus anthracis str. H9401
Taxonomy ID 768494
Molecule Role Protective antigen
Related Vaccines(s) B. anthracis DNA Vaccine expressing PA , Typhi strain Ty21a-PA (Bacillus anthracis)
References  
Gene Information
Gene Name PA
NCBI Gene ID 12796252
Genbank Accession CP002093
Locus Tag H9401_5741
Plasmid No BAP2
Gene Starting Position 46551
Gene Ending Position 46985
DNA Sequence
>NC_017727.1:46551-46985 Bacillus anthracis str. H9401 plasmid BAP2, complete sequence
ATTATAATTCCTTCGATTTACTTTTTAATGGTAAAACATATTGCTCTACTCTTTCATAAAGATTAAGTAT
TTGTGTAATAAATTTAATTTTTGGTACTATCCAATATGAAAATAAAGCTGAAATACTCCCTATTAAGGCG
CCTGTTGCAACATCAAAAGGATAATGAACCCCGACCCAAATACGAGAGATACCCACACAGAATGCAATTA
CAAGCAATAACAACCCAGCCTTTTTATGAACGAGCTTAACTGAAACACAAATTGAAAAAAATAGAATCGT
GTGATCACTAGGAAATGAATTATCCACTACATGATCAGCGAGTTTATTAACATCAGGTAATACTGCAAAT
GGTTGATAATTCAAATGCAATTTCCCTAGTAGCTTTCCAATTATCTCAGCAGTCATGAAAGCAAACACCG
CTTGTATAATCATCA

Protein Information
Protein Name Phosphoesterase PA-phosphatase related protein
NCBI Protein GI 386733821
Protein Accession YP_006204206
Protein pI 9.43
Protein Weight 14561.26
Protein Length 144
Protein Sequence
>YP_006204206.1 Phosphoesterase PA-phosphatase related protein (plasmid) [Bacillus anthracis str. H9401]
MMIIQAVFAFMTAEIIGKLLGKLHLNYQPFAVLPDVNKLADHVVDNSFPSDHTILFFSICVSVKLVHKKA
GLLLLVIAFCVGISRIWVGVHYPFDVATGALIGSISALFSYWIVPKIKFITQILNLYERVEQYVLPLKSK
SKEL

Vaxign Prediction
Localization(Probability) Cytoplasmic Membrane
(Prob.=0.999)
Adhesin Probability 0.197
Trans-membrane Helices 2
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope