VIOLIN: Vaccine Investigation and Online Information Network

gag from HIV-1 vector pNL4-3

General Information

Protegen ID

1751

Sequence Strain (Species/Organism)

HIV-1 vector pNL4-3

Taxonomy ID

11676

Other Database IDs

CDD:249943
CDD:279002
CDD:331526
CDD:312289

Molecule Role

Protective antigen

Related Vaccines(s)

SHIV DNA vaccine encoding env and gag , SHIV(Ba-L) DNA vaccine encoding env and gag

References

Gene Information

Gene Name

gag from HIV-1 vector pNL4-3

Protein Information

Protein Name

gag polyprotein

NCBI Protein GI

12831136

Protein pI

9.31

Protein Weight

54183.8

Protein Length

569

Protein Note

from sequence deposited in GenBank Accession Number M19921

Protein Sequence

>AAK08483.1 gag polyprotein (plasmid) [HIV-1 vector pNL4-3]
MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQT
GSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNLQG
QMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAA
EWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPT
SILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTAC
QGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEG
HQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKELYPLASLR
SLFGSDPSSQ

Epitope Information

IEDB Linear Epitope