VIOLIN: Vaccine Investigation and Online Information Network

Caf1 from Y. pestis biovar Microtus str. 91001

General Information

Protegen ID

Sequence Strain (Species/Organism)

Yersinia pestis biovar Microtus str. 91001

VO ID

VO_0010870

Taxonomy ID

229193

Molecule Role

Protective antigen

Related Vaccines(s)

Y. pestis DNA vaccine F1-V DNA , Y. pestis F1 protein vaccine

References

Gene Information

Gene Name

Caf1 from Y. pestis biovar Microtus str. 91001

NCBI Gene ID

2767670

Genbank Accession

AE017045

Locus Tag

YP_pMT082

Plasmid No

pMT1

Gene Starting Position

73339

Gene Ending Position

73851

DNA Sequence

>NC_005815.1:73339-73851 Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, complete sequence
ATTATTGGTTAGATACGGTTACGGTTACAGCATCAGTGTATTTACCTGCTGCAAGTTTACCGCCTTTGGA
ACCAATTGAGCGAACAAAGAAATCCTGGCTGCCCGTAGCCAAGACGACGTCATCCCCCACAAGGTTCTCA
CCGTTTACCTTAGGAGAGATATCAAAATCTCTAGAATCCTTGCCAATCACTTTTGTAGTGAATTGGTGGT
TATTTCCATCCTGAGAAGTAAATGTTAAGTACATGGGATCACCCGCGGCATCTGTAAAGTTAACAGATGT
GCTAGTGGTTCCTGTTTTATAGCCGCCAAGAGTAAGCGTACCAACAAGTAATTCTGTATCGATGTTTCCA
TTGTCCATAATTGTAATTGGAGCGCCTTCCTTATATGTAAGAGTGATGCGGGCTGGTTCAACAAGAGTTG
CCGTTGCAGTGGTGCTTGCAGTTAAATCTGCCGCATTAGCAGTTGCAATAGTTCCAAATAATGCAATGGC
GATAACGGAACTGATTTTTTTCA

Protein Information

Protein Name

F1 capsule antigen

NCBI Protein GI

45478667

Protein Accession

NP_995523

Protein pI

4.63

Protein Weight

16375.93

Protein Length

170

Protein Note

Best Blastp hit = gi|115437|sp|P26948|CAF1_YERPE F1 capsule antigen precursor, gi|96993|pir||S13008 capsular antigen F1 precursor Yersinia pestis plasmid pMT01, gi|48621|emb|CAA43966.1| (X61996) F1 capsule antigen [Yersinia pestis], gi|2996338| gb|AAC13218.1| (AF053947) F1 capsule antigen [Yersinia pestis], gi|3883098|gb|AAC82758.1| (AF074611) F1 capsule antigen [Yersinia pestis], gi|5834767|emb|CAB55266.1| (AL117211) putative F1 capsule antigen [Yersinia pestis]

Protein Sequence

>NP_995523.1 F1 capsule antigen (plasmid) [Yersinia pestis biovar Microtus str. 91001]
MKKISSVIAIALFGTIATANAADLTASTTATATLVEPARITLTYKEGAPITIMDNGNIDTELLVGTLTLG
GYKTGTTSTSVNFTDAAGDPMYLTFTSQDGNNHQFTTKVIGKDSRDFDISPKVNGENLVGDDVVLATGSQ
DFFVRSIGSKGGKLAAGKYTDAVTVTVSNQ

Epitope Information

IEDB Linear Epitope