HA
General Information
Protegen ID
527
Sequence Strain (Species/Organism)
Influenza A virus (A/environment/Hong Kong/156/1997(H5N1))
VO ID
VO_0011121
Taxonomy ID
680785
Other Database IDs
CDD:278910
Molecule Role
Protective antigen
Molecule Role Annotation
Researchers report that a DNA vaccine encoding hemagglutinin from the index human influenza isolate A/HK/156/97 provides immunity against H5N1 infection of mice (Kodihalli et al. , 1999 ).
Related Vaccines(s)
Influenza virus DNA vaccine encoding HA from Influenza A virus (A/environment/Hong Kong/156/1997(H5N1))
References
Kodihalli et al. , 1999: Kodihalli S, Goto H, Kobasa DL, Krauss S, Kawaoka Y, Webster RG. DNA vaccine encoding hemagglutinin provides protective immunity against H5N1 influenza virus infection in mice. Journal of virology . 1999; 73(3); 2094-2098. [PubMed: 9971791 ].
Gene Information
Gene Name
HA
Protein Information
Protein Name
hemagglutinin
NCBI Protein GI
269826115
Protein pI
7.18
Protein Weight
62144.96
Protein Length
665
Protein Note
passaged in allantoic fluid
Protein Sequence
>ACZ48512.1 hemagglutinin [Influenza A virus (A/environment/Hong Kong/156/1997(H5N1))]
MEKTVLLLATVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILERTHNGKLCDLNGVKPLILRD
CSVAGWLLGNPMCDEFINVPEWSYIVEKASPANDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKSSWSN
HDASSGVSSACPYLGRSSFFRNVVWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNP
TTYISVGTSTLNQRLVPEIATRPKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTI
MKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNTPQRERRRKKRGLFG
AIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIINKMNTQFEAVGREFNNLE
RRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKC
DNECMESVKNGTYDYPQYSEEARLNREEISGVKLESMGTYQILSIYSTVASSLALAIMVAGLSLWMCSNG
SLQCRICI
Epitope Information
IEDB Linear Epitope
-- Assay Type --
T Cell Epitope
B Cell Epitope
IEDB ID
Epitope
Starting position
Ending position
20838
GLFGAIAGFIE
347
358
538659
FGAIAGFIEG
349
359
97413
KCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRN
293
336
97700
TNQEDLLVLWGIHHPNDAAEQT
183
205
97441
LFGAIAGFIEGGWQGMVDGWYG
348
370
97376
GYHHSNEQGSGYAADKESTQKAIDGVTNK
369
398
97348
GLFGAIAGFIEGGW
347
361
97301
FFWTILKP
244
252
20836
GLFGAIAGF
347
356
97771
WYGYHHSN
367
375
102130
TKLYQNPTTYISVGT
204
219
97231
CNTKCQTP
290
298
224827
KPNDAINF
250
258
138194
IIPKSSWS
132
140
167382
RERRRKKRGLFGAIA
339
354
148521
CNTKCQTPMGAINSS
290
305
163243
RKKRGLFGAIAGFIE
343
358
162644
KESTQKAIDGVTNKVNS
384
401
243067
QEDLLVLWGIH
185
196
133590
GMVDGWYG
362
370
133748
YNAELLV
440
447
167383
RERRRKKRGLFGAIAGFI
339
357
177093
IATRPKVNGQSGRM
229
243
243602
VKPLI
63
68
243006
NGNFIAPEYAYKI
260
273
243849
WLLGNP
76
82
745433
WYGYHH
367
373
745428
WGIHH
192
197
29690
IYSTVASSL
535
544
221495
WMCSNGSLQCRICI
555
569
738340
GLFGAIAGFIEGGWQGMVDGWYGYHHSN
347
375
837494
HSNEQGSGYAADKE
372
386
837985
MENERTLDFHDSNV
448
462
840897
LVLWGIHHP
189
198
840970
WSYIVE
92
98
840943
SVKNGTYD
497
505
177340
VDGWYGYHHSNEQGSGYA
364
382
177236
RKKRGLFGAIAGFIEGGW
343
361
923970
YAADKESTQKAIDGVTNKVN
380
400
MEKTVLLLATVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILERTHNGKLCDLNGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKASPANDLCYPGNFNDYEELKHLLSRINHFEKIQIIPKSSWSNHDASSGVSSACPYLGRSSFFRNVVWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLNQRLVPEIATRPKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSTIMKSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNTPQRERRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIINKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYPQYSEEARLNREEISGVKLESMGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRICI