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RVFVsSgp2 N protein

General Information
Protegen ID 788
Sequence Strain (Species/Organism) Rift Valley fever virus
VO ID VO_0011319
Taxonomy ID 11588
Molecule Role Protective antigen
Molecule Role Annotation Immunisation of mice with cDNA encoding the nucleocapsid protein induced strong humoral and lymphocyte proliferative immune responses. Even though complete protection was not achieved by genetic immunisation, four out of eight mice vaccinated with cDNA encoding the nucleocapsid protein displayed no clinical signs of infection after challenge. In contrast, all fourteen control animals displayed clinical manifestations of Rift Valley Fever after challenge (Lagerqvist et al., 2009).
Related Vaccines(s) Rift Valley Fever Virus DNA Vaccine encoding N Protein
References
Lagerqvist et al., 2009: Lagerqvist N, Näslund J, Lundkvist A, Bouloy M, Ahlm C, Bucht G. Characterisation of immune responses and protective efficacy in mice after immunisation with Rift Valley Fever virus cDNA constructs. Virology journal. 2009; 6; 6. [PubMed: 19149901].
Gene Information
Gene Name RVFVsSgp2 N protein
NCBI Gene ID 956562
Genbank Accession X53771
Locus Tag RVFVsSgp2
Segment No segment S
Gene Starting Position 914
Gene Ending Position 1651
DNA Sequence
>NC_002045.1:914-1651 Rift Valley fever virus segment S, complete sequence
CTTAGGCTGCTGTCTTGTAAGCCTGAGCGGCTGCCATGACAGCAGCTGACGGCTTCCCATTGGAATCCAC
AAGTCCAAAGGCTTTCAAGAATTCTCTCCTCTTCTCATGGCTTATAAAGTTGCTATTCACTGCTGCATTC
ATTGGCTGCGTGAACGTTGCAGCAACCTCCTCTTTTGTTCTACCTCGGAGGTTTGGGTTGATGACCCGGG
AGAACTGCAGCAGATACAGAGAGTGAGCATCTAATATTGCCCTTAGATAGTCTCCTGGTAGAGAAGGATC
CACCATGCCAGCAAAGCTGGGGTGCATCATATGCCTCGGGTATGCAGGGGATAGGCCGTCCATGGTAGTC
CCAGTGACAGGAAGCCACTCACTCAAGACGACCAAAGCCTGGCATGTCCAGCCAGCCAAGGCGGCAGCAA
CTCGTGATAGAGTCAACTCATCCCGGGAAGGATTCCCTTCCTTTAGCTTATACTTGTTGATGAGAGCCTC
CACAGTTGCTTTGCCTTCTTTCGACATTTTCATCATCATCCTCCTGGGCTTGTTGCCACGAGTTAGAGCC
AGAACAATCATTTTCTTGGCATCCTTCTCCCAGTCAGCCCCACCATACTGCTTTAAGAGTTCGATAACTC
TACGGGCATCAAACCCTTGATAAGCAAACTCTCGGACCCACTGTTCAATCTCATTGCGGTCCACTGCTTG
AGCAGCAAACTGGACTCGAAGCTCTTGATAGTTGTCCA

Protein Information
Protein Name N protein
NCBI Protein GI 9632367
Protein Accession NP_049344
Protein pI 9.92
Protein Weight 25842.8
Protein Length 245
Protein Sequence
>NP_049344.1 N protein [Rift Valley fever virus]
MDNYQELRVQFAAQAVDRNEIEQWVREFAYQGFDARRVIELLKQYGGADWEKDAKKMIVLALTRGNKPRR
MMMKMSKEGKATVEALINKYKLKEGNPSRDELTLSRVAAALAGWTCQALVVLSEWLPVTGTTMDGLSPAY
PRHMMHPSFAGMVDPSLPGDYLRAILDAHSLYLLQFSRVINPNLRGRTKEEVAATFTQPMNAAVNSNFIS
HEKRREFLKAFGLVDSNGKPSAAVMAAAQAYKTAA

Vaxign Prediction
Localization(Probability)
(Prob.=0)
Adhesin Probability 0.209
Trans-membrane Helices 0
Detailed Vaxign Results Vaxign Results
Epitope Information
IEDB Linear Epitope